RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 NEK4P51957 841 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 PDE3AQ14432 1141 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ANKDD1AQ495B1 522 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 PPP4R3BQ5MIZ7 849 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 KDELC1Q6UW63 502 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 AHI1Q8N157 1196 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 OR2C3Q8N628 320 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 SLC35G2Q8TBE7 412 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 RUFY2Q8WXA3 655 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 PPP1R16BQ96T49 567 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 SLC39A3Q9BRY0 314 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ZNF304Q9HCX3 659 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 NPHS2Q9NP85 383 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ANGPTL3Q9Y5C1 460 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 XPOTO43592 962 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 DGKIO75912 1065 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC172P0C7W6 258 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ABCB4P21439 1286 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ADH7P40394 386 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 KCNJ6P48051 423 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CTCFP49711 727 aaPredicted RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 USP4Q13107 963 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CLUL1Q15846 466 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CTC1Q2NKJ3 1217 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 INAVAQ3KP66 663 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 UTP14CQ5TAP6 766 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 TMEM151BQ8IW70 566 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 TRIM42Q8IWZ5 723 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CMTR2Q8IYT2 770 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 ANKRD52Q8NB46 1076 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 OR6P1Q8NGX9 317 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 USP7Q93009 1102 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CLMNQ96JQ2 1002 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 MENTQ9BUN1 341 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 MTFR1LQ9H019 292 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 TRIT1Q9H3H1 467 aaKnown RBP8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 IFT22Q9H7X7 185 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 SH3BGRL2Q9UJC5 107 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 COG5Q9UP83 839 aa8.44□□□□□ -1.06
PDGFRA-206ENST00000508170 CCP110O43303 1012 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 VCAM1P19320 739 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 RBM5P52756 815 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 RRP1P56182 461 aaKnown RBP8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 IL1RL1Q01638 556 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 MLLT1Q03111 559 aaPredicted RBP8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 BTKQ06187 659 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 NSUN2Q08J23 767 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 FAM156AQ8NDB6 213 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 ASB12Q8WXK4 309 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 KIAA1191Q96A73 305 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 SLF1Q9BQI6 1058 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 STK31Q9BXU1 1019 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 PCDHGB5Q9Y5G0 923 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 VPS8Q8N3P4 1428 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 RAPGEF2Q9Y4G8 1499 aa8.43□□□□□ -1.06
PDGFRA-206ENST00000508170 M0QX08 132 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 SART1O43290 800 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 MTRF1O75570 445 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 NPTXRO95502 500 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 POLBP06746 335 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 PYGMP11217 842 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 POU3F2P20265 443 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CNTFP26441 200 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 TMOD1P28289 359 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 HNF4AP41235 474 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 MAGEA8P43361 318 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CLCN2P51788 898 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 YARSP54577 528 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 DRG2P55039 364 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 ZNF267Q14586 743 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 ZNF460Q14592 562 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 LLGL1Q15334 1064 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 FAM209AQ5JX71 171 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 TTC39AQ5SRH9 613 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 HGSNATQ68CP4 663 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 ALKBH5Q6P6C2 394 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 DZIP1Q86YF9 867 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 COLGALT2Q8IYK4 626 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 MYOCDQ8IZQ8 938 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 L3MBTL2Q969R5 705 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 NACC2Q96BF6 587 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 RIPOR3Q96MK2 946 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 PRDM5Q9NQX1 630 aaPredicted RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 EXOC1Q9NV70 894 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 POLHQ9Y253 713 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 TMEM229AB2RXF0 380 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 SLC7A4O43246 635 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 USO1O60763 962 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 GOSR1O95249 250 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 LIFRP42702 1097 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CLNS1AP54105 237 aaKnown RBP8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 CYP4A11Q02928 519 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 MAP7Q14244 749 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 TAF12Q16514 161 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 FKBP15Q5T1M5 1219 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 LIN54Q6MZP7 749 aa8.42□□□□□ -1.06
PDGFRA-206ENST00000508170 SYNE3Q6ZMZ3 975 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms