RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 PPFIBP1Q86W92 1011 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 ZNF507Q8TCN5 953 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 TMEM39BQ9GZU3 492 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 LGALS16A8MUM7 142 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 SYCP1Q15431 976 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 CNGA4Q8IV77 575 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 KIF18AQ8NI77 898 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 TAB2Q9NYJ8 693 aa19.75■□□□□ 0.75
SFXN1-208ENST00000507823 FCER1AP12319 257 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 CCT6AP40227 531 aaKnown RBP19.74■□□□□ 0.75
SFXN1-208ENST00000507823 SNAP25P60880 206 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 CDAN1Q8IWY9 1227 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 GUF1Q8N442 669 aaKnown RBP19.74■□□□□ 0.75
SFXN1-208ENST00000507823 DNAJC19Q96DA6 116 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 TRIM47Q96LD4 638 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 SRRTQ9BXP5 876 aaKnown RBP19.74■□□□□ 0.75
SFXN1-208ENST00000507823 TAOK3Q9H2K8 898 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 SH2D4AQ9H788 454 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 GOLGA6L9A6NEM1 432 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 CHURC1Q8WUH1 139 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 FAM20AQ96MK3 541 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 VEZTQ9HBM0 779 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 PPP2R2CQ9Y2T4 447 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 ATAD5Q96QE3 1844 aa19.74■□□□□ 0.75
SFXN1-208ENST00000507823 IKQ13123 557 aaPredicted RBP19.73■□□□□ 0.75
SFXN1-208ENST00000507823 ANKRD40Q6AI12 368 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 TRIM65Q6PJ69 517 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 FAM160B2Q86V87 743 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 DEFB129Q9H1M3 183 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 VPS16Q9H269 839 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 MYOZ2Q9NPC6 264 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 STK24Q9Y6E0 443 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 SMCHD1A6NHR9 2005 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 SPDYE3A6NKU9 549 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
SFXN1-208ENST00000507823 ETF1P62495 437 aaKnown RBP19.73■□□□□ 0.75
SFXN1-208ENST00000507823 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 SPICE1Q8N0Z3 855 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 LTBP3Q9NS15 1303 aa19.73■□□□□ 0.75
SFXN1-208ENST00000507823 NFKBIEO00221 500 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 USH1GQ495M9 461 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 FAM83BQ5T0W9 1011 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 FAM114A1Q8IWE2 563 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 CSGALNACT2Q8N6G5 542 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 MB21D1Q8N884 522 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 DDX12PQ92771 950 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 SEMA6BQ9H3T3 888 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 L2HGDHQ9H9P8 463 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 PHLPP2Q6ZVD8 1323 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 TNIP1Q15025 636 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 GJA10Q969M2 543 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 MTFR1LQ9H019 292 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 GINM1Q9NU53 330 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 PHF20L1A8MW92 1017 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 MARCH6O60337 910 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 ASNSP08243 561 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 FXR1P51114 621 aaKnown RBP eCLIP19.72■□□□□ 0.75
SFXN1-208ENST00000507823 NBPF9Q3BBW0 867 aa19.72■□□□□ 0.75
SFXN1-208ENST00000507823 ABCB11O95342 1321 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 FAM86B1E9PN63 330 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 FAM86B2P0C5J1 330 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 CASP14P31944 242 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 KCTD17Q8N5Z5 321 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 FEM1BQ9UK73 627 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 JDP2Q8WYK2 163 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 TEPSINQ96N21 525 aa19.71■□□□□ 0.75
SFXN1-208ENST00000507823 MAGEC2Q9UBF1 373 aaPredicted RBP19.71■□□□□ 0.75
SFXN1-208ENST00000507823 DNM2P50570 870 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 HAUS3Q68CZ6 603 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 TOGARAM2Q6ZUX3 1019 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 FRMD3A2A2Y4 597 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 TPM1P09493 284 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 POLD1P28340 1107 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 UBXN1Q04323 297 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 LRRC63Q05C16 580 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 PRR16Q569H4 304 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 SLC39A2Q9NP94 309 aa19.7■□□□□ 0.74
SFXN1-208ENST00000507823 IGLV3-22A0A075B6J6 115 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 DYMQ7RTS9 669 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 ZNF592Q92610 1267 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 VAV3Q9UKW4 847 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 PITPNM2Q9BZ72 1349 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 MED24O75448 989 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 ZBTB7AO95365 584 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 RPA1P27694 616 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 PTGER2P43116 358 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 RAD9BQ6WBX8 426 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 MIGA2Q7L4E1 593 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 CNOT6LQ96LI5 555 aaKnown RBP19.69■□□□□ 0.74
SFXN1-208ENST00000507823 TUBGCP2Q9BSJ2 902 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 ABHD10Q9NUJ1 306 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 KIAA1024Q9UPX6 916 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 PCDHA2Q9Y5H9 948 aa19.69■□□□□ 0.74
SFXN1-208ENST00000507823 MSH4O15457 936 aa19.68■□□□□ 0.74
SFXN1-208ENST00000507823 PLA2G4BP0C869 781 aa19.68■□□□□ 0.74
SFXN1-208ENST00000507823 TAL1P17542 331 aaPredicted RBP19.68■□□□□ 0.74
SFXN1-208ENST00000507823 SLC12A3P55017 1021 aa19.68■□□□□ 0.74
SFXN1-208ENST00000507823 COASYQ13057 564 aa19.68■□□□□ 0.74
SFXN1-208ENST00000507823 SYT10Q6XYQ8 523 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms