RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 MMP3P08254 477 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 MRPL12P52815 198 aaKnown RBP16.4■□□□□ 0.22
DDR1-260ENST00000507533 HTRA4P83105 476 aaPredicted RBP16.4■□□□□ 0.22
DDR1-260ENST00000507533 COL19A1Q14993 1142 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 C7orf31Q8N865 590 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 DNERQ8NFT8 737 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
DDR1-260ENST00000507533 DCAF4Q8WV16 495 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 NSUN3Q9H649 340 aaKnown RBP16.4■□□□□ 0.22
DDR1-260ENST00000507533 IL17RBQ9NRM6 502 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 HDAC6Q9UBN7 1215 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 MUTYHQ9UIF7 546 aa16.4■□□□□ 0.22
DDR1-260ENST00000507533 USP34Q70CQ2 3546 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 TSPY2A6NKD2 308 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 NMT2O60551 498 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 LGR5O75473 907 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 ZFYP08048 801 aaPredicted RBP16.39■□□□□ 0.21
DDR1-260ENST00000507533 CASTP20810 708 aaKnown RBP16.39■□□□□ 0.21
DDR1-260ENST00000507533 PTPN5P54829 565 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 RPS6P62753 249 aaKnown RBP16.39■□□□□ 0.21
DDR1-260ENST00000507533 PPARAQ07869 468 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 PTK7Q13308 1070 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 MBTPS1Q14703 1052 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 HERC4Q5GLZ8 1057 aaPredicted RBP16.39■□□□□ 0.21
DDR1-260ENST00000507533 ZNF618Q5T7W0 954 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 TRAF7Q6Q0C0 670 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 BTNL9Q6UXG8 535 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 SIP14410 1827 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 MYH7P12883 1935 aa16.39■□□□□ 0.21
DDR1-260ENST00000507533 GH1P01241 217 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 ARHGAP1Q07960 439 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 LY6KQ17RY6 165 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 TRIM71Q2Q1W2 868 aaKnown RBP16.38■□□□□ 0.21
DDR1-260ENST00000507533 IER5LQ5T953 404 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 RPAINQ86UA6 219 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
DDR1-260ENST00000507533 ALG1Q9BT22 464 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 NAPBQ9H115 298 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
DDR1-260ENST00000507533 TRIOO75962 3097 aa16.38■□□□□ 0.21
DDR1-260ENST00000507533 NCK2O43639 380 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
DDR1-260ENST00000507533 LTBRP36941 435 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 PSEN2P49810 448 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 SMAD2Q15796 467 aaKnown RBP16.37■□□□□ 0.21
DDR1-260ENST00000507533 CLUL1Q15846 466 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 DGKDQ16760 1214 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 RNF135Q8IUD6 432 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 TMEM192Q8IY95 271 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 EDAQ92838 391 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 WNT8BQ93098 351 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 YME1L1Q96TA2 773 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 LRRCC1Q9C099 1032 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
DDR1-260ENST00000507533 ZNF318Q5VUA4 2279 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 ZNF200P98182 395 aaPredicted RBP16.36■□□□□ 0.21
DDR1-260ENST00000507533 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
DDR1-260ENST00000507533 SEPT14Q6ZU15 432 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 BMP8AQ7Z5Y6 402 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 PRRX2Q99811 253 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDR1-260ENST00000507533 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
DDR1-260ENST00000507533 EMSYQ7Z589 1322 aa16.36■□□□□ 0.21
DDR1-260ENST00000507533 MBTPS2O43462 519 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 CTDSPL2Q05D32 466 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 MFSD10Q14728 455 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 KIAA0753Q2KHM9 967 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 PBXIP1Q96AQ6 731 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
DDR1-260ENST00000507533 SEC62Q99442 399 aaKnown RBP16.35■□□□□ 0.21
DDR1-260ENST00000507533 KATNAL1Q9BW62 490 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
DDR1-260ENST00000507533 TMEM221A6NGB7 291 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 M0R296 226 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 RANBP6O60518 1105 aaKnown RBP16.34■□□□□ 0.21
DDR1-260ENST00000507533 UPP2O95045 317 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 NOVP48745 357 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 DLX2Q07687 328 aaPredicted RBP16.34■□□□□ 0.21
DDR1-260ENST00000507533 PKN1Q16512 942 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 TOP1MTQ969P6 601 aa16.34■□□□□ 0.21
DDR1-260ENST00000507533 STXBP3O00186 592 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 HAS3O00219 553 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 GFRA3O60609 400 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 THPOP40225 353 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 TCF15Q12870 199 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 PLEKHG4Q58EX7 1191 aa16.33■□□□□ 0.2
DDR1-260ENST00000507533 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms