RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 HOMER1Q86YM7 354 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 POU5F2Q8N7G0 328 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 APPBP2Q92624 585 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 TSPAN17Q96FV3 270 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 SCLYQ96I15 445 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 CLUHP3Q96NS8 147 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 DIRC2Q96SL1 478 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 MCOLN1Q9GZU1 580 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 NSUN3Q9H649 340 aaKnown RBP4.34□□□□□ -1.71
GYPB-207ENST00000506679 FANCLQ9NW38 375 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 CLDND1Q9NY35 253 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 SFMBT1Q9UHJ3 866 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 MBD1Q9UIS9 605 aaPredicted RBP4.34□□□□□ -1.71
GYPB-207ENST00000506679 RNF114Q9Y508 228 aa4.34□□□□□ -1.71
GYPB-207ENST00000506679 IRS2Q9Y4H2 1338 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 TEX51A0A1B0GUA7 166 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 A0A1W2PQJ5 194 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 ZC3H12DA2A288 527 aaKnown RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 NUDT19A8MXV4 375 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 PPP1R12AO14974 1030 aaPredicted RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 SGSM2O43147 1006 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 SEMA7AO75326 666 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 ASMTLO95671 621 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 CRTAMO95727 393 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 NAT1P18440 290 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 RAB3GAP1Q15042 981 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 PLEKHG4Q58EX7 1191 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 OGFOD2Q6N063 350 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 C16orf86Q6ZW13 317 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 DCP2Q8IU60 420 aaKnown RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 FBXO15Q8NCQ5 510 aaPredicted RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.33□□□□□ -1.72
GYPB-207ENST00000506679 TRMT2BQ96GJ1 504 aaKnown RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 PEX11GQ96HA9 241 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 EPB41L1Q9H4G0 881 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 KCNK12Q9HB15 430 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 GCM1Q9NP62 436 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 DCP1AQ9NPI6 582 aaPredicted RBP4.33□□□□□ -1.72
GYPB-207ENST00000506679 BTG4Q9NY30 223 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 NDOR1Q9UHB4 597 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 HCFC2Q9Y5Z7 792 aa4.33□□□□□ -1.72
GYPB-207ENST00000506679 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 CDC45O75419 566 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 TADA3O75528 432 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 RAPGEF3O95398 923 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 SOD2P04179 222 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 KRT1P04264 644 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 MED14OSP0DP75 135 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 KCNA6P17658 529 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 PAK1Q13153 545 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 SLC9A5Q14940 896 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 TCEA2Q15560 299 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 OLFML2BQ68BL8 750 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 SDE2Q6IQ49 451 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 CYP4F22Q6NT55 531 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 ZC3H14Q6PJT7 736 aaKnown RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 TMC6Q7Z403 805 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 BRAPQ7Z569 592 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 FGD2Q7Z6J4 655 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 MTDHQ86UE4 582 aaKnown RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 BHLHE22Q8NFJ8 381 aaPredicted RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 PCDH19Q8TAB3 1148 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 USP33Q8TEY7 942 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 SEC14L1Q92503 715 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 ALG1Q9BT22 464 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 PDGFDQ9GZP0 370 aaPredicted RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 CNTD2Q9H8S5 307 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 IPPKQ9H8X2 491 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 RXFP1Q9HBX9 757 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 NUDT5Q9UKK9 219 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 ZNF652Q9Y2D9 606 aa4.32□□□□□ -1.72
GYPB-207ENST00000506679 COA3Q9Y2R0 106 aaPredicted RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 TMA7Q9Y2S6 64 aaKnown RBP4.32□□□□□ -1.72
GYPB-207ENST00000506679 TCRBV16S1A1N1A0A5B0 115 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 FAM47E-STBD1D6RA91 191 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 DGKIO75912 1065 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 DNAJC8O75937 253 aaPredicted RBP4.31□□□□□ -1.72
GYPB-207ENST00000506679 RASGRP1O95267 797 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 ZBTB7AO95365 584 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 CKMP06732 381 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 GLDCP23378 1020 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 SRSF3P84103 164 aaKnown RBP4.31□□□□□ -1.72
GYPB-207ENST00000506679 PRR5P85299 388 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 GUCY1A3Q02108 690 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 PABPC4Q13310 644 aaKnown RBP eCLIP4.31□□□□□ -1.722e-6■■□□□ 11.4
GYPB-207ENST00000506679 CHRNA2Q15822 529 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 OTOP3Q7RTS5 596 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 MIB1Q86YT6 1006 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 UHMK1Q8TAS1 419 aaKnown RBP4.31□□□□□ -1.72
GYPB-207ENST00000506679 CHAMP1Q96JM3 812 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 FAM84AQ96KN4 292 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 FEZ1Q99689 392 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 JAM3Q9BX67 310 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 SLC6A20Q9NP91 592 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 SIT1Q9Y3P8 196 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 PCDHA9Q9Y5H5 950 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 PCDHA8Q9Y5H6 950 aa4.31□□□□□ -1.72
GYPB-207ENST00000506679 PCDHA5Q9Y5H7 936 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms