RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 DACT2Q5SW24 774 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 NBPF5PQ86XG9 351 aaPredicted RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 THNSL2Q86YJ6 484 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
SCLT1-207ENST00000506233 ZSCAN10Q96SZ4 725 aaPredicted RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 CDC5LQ99459 802 aaKnown RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 NOL7Q9UMY1 257 aaKnown RBP6.8□□□□□ -1.32
SCLT1-207ENST00000506233 RASSF10A6NK89 507 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 DXOO77932 396 aaKnown RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 HIBADHP31937 336 aaKnown RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 FOXK2Q01167 660 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 MCL1Q07820 350 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 ARID5BQ14865 1188 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 FAM47AQ5JRC9 791 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 CCDC183Q5T5S1 534 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 C1orf53Q5VUE5 145 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 TMTC3Q6ZXV5 915 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 SLC9A9Q8IVB4 645 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 FAM43AQ8N2R8 423 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 TRPM4Q8TD43 1214 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 TMEM87BQ96K49 555 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 NYXQ9GZU5 481 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 CBX8Q9HC52 389 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 KCNJ14Q9UNX9 436 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 A0A1W2PQ27 194 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 A0A1W2PQ64 194 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 A0A1W2PQD8 194 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 hCG_1642624A0A1W2PR95 340 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 BTBD18B2RXH4 712 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 CYP7A1P22680 504 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 IMMTQ16891 758 aaKnown RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 DDX42Q86XP3 938 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 CLEC10AQ8IUN9 316 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 FANCBQ8NB91 859 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 POLR2AP24928 1970 aaKnown RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 ZNF500O60304 480 aaPredicted RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 POLD1P28340 1107 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 ARSHQ5FYA8 562 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 ADALQ6DHV7 355 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 KIAA1211Q6ZU35 1233 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 MMTAG2Q9BU76 263 aaKnown RBP6.79□□□□□ -1.32
SCLT1-207ENST00000506233 SPTLC3Q9NUV7 552 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 RABGEF1Q9UJ41 708 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 TLR6Q9Y2C9 796 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
SCLT1-207ENST00000506233 EGFRP00533 1210 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 LINC01559Q495D7 138 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 DPY19L2P1Q6NXN4 242 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 LUZP1Q86V48 1076 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 HOMER1Q86YM7 354 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 GPR152Q8TDT2 470 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 NPHS2Q9NP85 383 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 GOLGA8BA8MQT2 603 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 RBM6P78332 1123 aaKnown RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 DPCR1Q3MIW9 517 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 TPTE2Q6XPS3 522 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 OLIG1Q8TAK6 271 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 CCDC74AQ96AQ1 378 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 MPHOSPH8Q99549 860 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 CPVLQ9H3G5 476 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 SCHIP1Q9P0W5 487 aaPredicted RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 PYCARDQ9ULZ3 195 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 ZNF652Q9Y2D9 606 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 STXBP3O00186 592 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 FBXO24O75426 580 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 ZNF18P17022 549 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 RAB27AP51159 221 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 TATDN1Q6P1N9 297 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 C17orf53Q8N3J3 647 aaPredicted RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 GPATCH11Q8N954 259 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 DPF2Q92785 391 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 NLRP3Q96P20 1036 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 TNKS2Q9H2K2 1166 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 ZSCAN16Q9H4T2 348 aaPredicted RBP6.78□□□□□ -1.32
SCLT1-207ENST00000506233 PFDN2Q9UHV9 154 aa6.78□□□□□ -1.32
SCLT1-207ENST00000506233 DDTLA6NHG4 134 aaPredicted RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 PBX1P40424 430 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 ST13P50502 369 aaKnown RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 FAM160A1Q05DH4 1040 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 CBX2Q14781 532 aaPredicted RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 CAMK4Q16566 473 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 DDR2Q16832 855 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 ELOA2Q8IYF1 753 aaPredicted RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 PRKAG3Q9UGI9 489 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 A0A1B0GVL5 298 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 RNF225M0QZC1 329 aaPredicted RBP6.77□□□□□ -1.33
SCLT1-207ENST00000506233 PPP6R2O75170 966 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 ASMTLO95671 621 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 INHAP05111 366 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 PFKFB1P16118 471 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 TYRO3Q06418 890 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 DGKZQ13574 1117 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 CNBD1Q8NA66 436 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 RAB6BQ9NRW1 208 aa6.77□□□□□ -1.33
SCLT1-207ENST00000506233 PLXNB2O15031 1838 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms