RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CABYRO75952 493 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 DDAH1O94760 285 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 MCM5P33992 734 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 TTLL4Q14679 1199 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 PGM5Q15124 567 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 TJAP1Q5JTD0 557 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 CASC1Q6TDU7 716 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 NOC4LQ9BVI4 516 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 SPZ1Q9BXG8 430 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 MAF1Q9H063 256 aa19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 ALDH8A1Q9H2A2 487 aaPredicted RBP19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 DDX41Q9UJV9 622 aaKnown RBP19.4■□□□□ 0.7
PDLIM7-215ENST00000506161 NKRFO15226 690 aaKnown RBP eCLIP19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 MMP3P08254 477 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 CYP2C9P11712 490 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 MYCLP12524 364 aaPredicted RBP19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 CPA1P15085 419 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 EXOSC10Q01780 885 aaKnown RBP19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 SP2Q02086 613 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 STXBP2Q15833 593 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 NBPF20Q3BBV1 942 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 TMEM240Q5SV17 173 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 KAT2BQ92831 832 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 CCDC136Q96JN2 1154 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 TMEM87BQ96K49 555 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 CTAGE1Q96RT6 745 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 IWS1Q96ST2 819 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 MAP3K14Q99558 947 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 BRPF3Q9ULD4 1205 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 PRUNE2Q8WUY3 3088 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
PDLIM7-215ENST00000506161 ZEB2O60315 1214 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 LIFRP42702 1097 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 CPT1AP50416 773 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 CCL23P55773 120 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 USP17L6PQ6QN14 398 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 FCHSD1Q86WN1 690 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 RNPC3Q96LT9 517 aaKnown RBP19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 MTG1Q9BT17 334 aaPredicted RBP19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 MTA3Q9BTC8 594 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 POLR3EQ9NVU0 708 aa19.38■□□□□ 0.69
PDLIM7-215ENST00000506161 FRMPD4Q14CM0 1322 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 TMEM265A0A087WTH1 108 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 GRXCR1A8MXD5 290 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 TLR3O15455 904 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 MRPS9P82933 396 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 SEMA3FQ13275 785 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 NFXL1Q6ZNB6 911 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 VSIG10LQ86VR7 867 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 CCDC82Q8N4S0 544 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 CTCFLQ8NI51 663 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 SCLYQ96I15 445 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 HIPK3Q9H422 1215 aa19.37■□□□□ 0.69
PDLIM7-215ENST00000506161 CCDC69A6NI79 296 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 GCOM1H8Y6P7 765 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 MEIS2O14770 477 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 EIF3JO75822 258 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 GH1P01241 217 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 POLR2MP0CAP2 368 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 RASIP1Q5U651 963 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 ZNF365Q70YC5 407 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 SGMS1Q86VZ5 419 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 MICU3Q86XE3 530 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 NEK1Q96PY6 1258 aa19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 MPHOSPH6Q99547 160 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-215ENST00000506161 CNTNAP5Q8WYK1 1306 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 FUT2Q10981 343 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 HIC1Q14526 733 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 TSGA10IPQ3SY00 556 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 TYW1BQ6NUM6 668 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 APOA5Q6Q788 366 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 TMTC3Q6ZXV5 915 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 FAM217BQ9NTX9 383 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 CXXC1Q9P0U4 656 aaPredicted RBP19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 RAPGEFL1Q9UHV5 662 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 MRVI1Q9Y6F6 885 aa19.35■□□□□ 0.69
PDLIM7-215ENST00000506161 B4DLN1 442 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 ZNF286BP0CG31 522 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 UBA1P22314 1058 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 MRPL12P52815 198 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 CHMP4BP1P59074 171 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 PPIGQ13427 754 aaKnown RBP eCLIP19.34■□□□□ 0.699e-7■■■□□ 16.9
PDLIM7-215ENST00000506161 HSDL1Q3SXM5 330 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 FAM47CQ5HY64 1035 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 KCNB2Q92953 911 aa19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 RRP36Q96EU6 259 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 MAP3K20Q9NYL2 800 aaKnown RBP19.34■□□□□ 0.69
PDLIM7-215ENST00000506161 CDH23Q9H251 3354 aa19.33■□□□□ 0.69
PDLIM7-215ENST00000506161 SMARCA1P28370 1054 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 KIF5BP33176 963 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 PBX2P40425 430 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 UBE2SQ16763 222 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 MYSM1Q5VVJ2 828 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 GDF6Q6KF10 455 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 FANCBQ8NB91 859 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 IL23AQ9NPF7 189 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 RTEL1Q9NZ71 1219 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 SLC12A7Q9Y666 1083 aa19.33■□□□□ 0.68
PDLIM7-215ENST00000506161 GGPS1O95749 300 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms