RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 DBR1Q9UK59 544 aaKnown RBP8.28□□□□□ -1.08
NIPBL-205ENST00000505998 ABLIM1O14639 778 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-205ENST00000505998 NTRK1P04629 796 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 MROH9Q5TGP6 573 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 OLFML2BQ68BL8 750 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 C16orf86Q6ZW13 317 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 NETO2Q8NC67 525 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 ZNF552Q9H707 407 aaPredicted RBP8.27□□□□□ -1.09
NIPBL-205ENST00000505998 NUDT5Q9UKK9 219 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 X6R8D5 127 aa8.27□□□□□ -1.09
NIPBL-205ENST00000505998 ZC3H12DA2A288 527 aaKnown RBP8.26□□□□□ -1.09
NIPBL-205ENST00000505998 F8W031 263 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-205ENST00000505998 PAX4O43316 350 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 RAPGEF3O95398 923 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 GRK2P25098 689 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 GRK3P35626 688 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 GUCY1A3Q02108 690 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 FNDC3BQ53EP0 1204 aaKnown RBP8.26□□□□□ -1.09
NIPBL-205ENST00000505998 RPTNQ6XPR3 784 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 RIOX2Q8IUF8 465 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 GSTCDQ8NEC7 633 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 SLC7A14Q8TBB6 771 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 KLHL14Q9P2G3 628 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 PPARGC1AQ9UBK2 798 aaKnown RBP8.26□□□□□ -1.09
NIPBL-205ENST00000505998 PCDHA8Q9Y5H6 950 aa8.26□□□□□ -1.09
NIPBL-205ENST00000505998 BAZ1BQ9UIG0 1483 aaKnown RBP8.26□□□□□ -1.09
NIPBL-205ENST00000505998 ENPP3O14638 875 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 SOD2P04179 222 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 CBX2Q14781 532 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-205ENST00000505998 SDE2Q6IQ49 451 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 BRAPQ7Z569 592 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 DCP2Q8IU60 420 aaKnown RBP8.25□□□□□ -1.09
NIPBL-205ENST00000505998 PEX11GQ96HA9 241 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 MAGEB10Q96LZ2 347 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-205ENST00000505998 EPB41L1Q9H4G0 881 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 RXFP1Q9HBX9 757 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 PCDHA9Q9Y5H5 950 aa8.25□□□□□ -1.09
NIPBL-205ENST00000505998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-205ENST00000505998 FAM47E-STBD1D6RA91 191 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 HRKO00198 91 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 DGKIO75912 1065 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 CRTAMO95727 393 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 MAPKAPK2P49137 400 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 YBX1P67809 324 aaKnown RBP8.24□□□□□ -1.09
NIPBL-205ENST00000505998 PAK1Q13153 545 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 ZC3H14Q6PJT7 736 aaKnown RBP8.24□□□□□ -1.09
NIPBL-205ENST00000505998 FBXO15Q8NCQ5 510 aaPredicted RBP8.24□□□□□ -1.09
NIPBL-205ENST00000505998 JAM3Q9BX67 310 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 AP5M1Q9H0R1 490 aa8.24□□□□□ -1.09
NIPBL-205ENST00000505998 KCNQ2O43526 872 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 PLEKHN1Q494U1 663 aaPredicted RBP8.23□□□□□ -1.09
NIPBL-205ENST00000505998 TMC6Q7Z403 805 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 CLUHP3Q96NS8 147 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 KCNJ15Q99712 375 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 CDIP1Q9H305 208 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 IPPKQ9H8X2 491 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
NIPBL-205ENST00000505998 PEX10O60683 326 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 RASGRP1O95267 797 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 VIPR1P32241 457 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 SLC6A11P48066 632 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 SRSF3P84103 164 aaKnown RBP8.22□□□□□ -1.09
NIPBL-205ENST00000505998 PRR5P85299 388 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 PABPC4Q13310 644 aaKnown RBP eCLIP8.22□□□□□ -1.09
NIPBL-205ENST00000505998 CHRNA2Q15822 529 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 TKFCQ3LXA3 575 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 SEC14L1Q92503 715 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 FEZ1Q99689 392 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 KCNK12Q9HB15 430 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 TRIM39Q9HCM9 518 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 SIT1Q9Y3P8 196 aa8.22□□□□□ -1.09
NIPBL-205ENST00000505998 PRDM2Q13029 1718 aa8.21□□□□□ -1.09
NIPBL-205ENST00000505998 ARVCFO00192 962 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 SMARCA5O60264 1052 aaPredicted RBP8.21□□□□□ -1.1
NIPBL-205ENST00000505998 RFPL3O75679 317 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 ZBTB7AO95365 584 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 SRGAP2CP0DJJ0 459 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 C21orf62-AS1Q17RA5 79 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 FGD2Q7Z6J4 655 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 ZC3H7AQ8IWR0 971 aaKnown RBP8.21□□□□□ -1.1
NIPBL-205ENST00000505998 SCLYQ96I15 445 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 MCOLN1Q9GZU1 580 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 HCFC2Q9Y5Z7 792 aa8.21□□□□□ -1.1
NIPBL-205ENST00000505998 MYOCOSA0A1B0GUC4 107 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 KRIT1O00522 736 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 FARP2O94887 1054 aaPredicted RBP8.2□□□□□ -1.1
NIPBL-205ENST00000505998 CLSTN1O94985 981 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 GNAT1P11488 350 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 HSD3B2P26439 372 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 SPIRE1Q08AE8 756 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 SLC9A5Q14940 896 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 PLEKHG4Q58EX7 1191 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 STEAP3Q658P3 488 aa8.2□□□□□ -1.1
NIPBL-205ENST00000505998 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms