RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ABCB11O95342 1321 aa19.32■□□□□ 0.68
TRAPPC11-204ENST00000505676 POTEMA6NI47 508 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 GUF1Q8N442 669 aaKnown RBP19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 KIF20AO95235 890 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 MTERF4Q7Z6M4 381 aaKnown RBP19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 TMEM139Q8IV31 216 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 LPAR1Q92633 364 aa19.31■□□□□ 0.68
TRAPPC11-204ENST00000505676 FECHP22830 423 aa19.3■□□□□ 0.68
TRAPPC11-204ENST00000505676 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
TRAPPC11-204ENST00000505676 LRRC63Q05C16 580 aa19.3■□□□□ 0.68
TRAPPC11-204ENST00000505676 SYCP1Q15431 976 aa19.3■□□□□ 0.68
TRAPPC11-204ENST00000505676 HOOK2Q96ED9 719 aa19.3■□□□□ 0.68
TRAPPC11-204ENST00000505676 LGALS16A8MUM7 142 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 MCM6Q14566 821 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 CSGALNACT2Q8N6G5 542 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 ETNPPLQ8TBG4 499 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 MYMKA6NI61 221 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 DNM2P50570 870 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 FAM83BQ5T0W9 1011 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 CENPPQ6IPU0 288 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 PITPNM2Q9BZ72 1349 aa19.29■□□□□ 0.68
TRAPPC11-204ENST00000505676 USP27XA6NNY8 438 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 GCOM1H8Y6P7 765 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 TEX33O43247 280 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 MFAP3LO75121 409 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 POLR2MP0CAP2 368 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 ECE1P42892 770 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 EHHADHQ08426 723 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 USH1GQ495M9 461 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 RETREG2Q8NC44 543 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 MUTP22033 750 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 CCDC65Q8IXS2 484 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 MAP7D2Q96T17 732 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 NUP58Q9BVL2 599 aa19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 SRRTQ9BXP5 876 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 TRMT1Q9NXH9 659 aaKnown RBP19.28■□□□□ 0.68
TRAPPC11-204ENST00000505676 WDR46O15213 610 aaKnown RBP19.27■□□□□ 0.68
TRAPPC11-204ENST00000505676 STK4Q13043 487 aa19.27■□□□□ 0.68
TRAPPC11-204ENST00000505676 DDX12PQ92771 950 aa19.27■□□□□ 0.68
TRAPPC11-204ENST00000505676 TSG101Q99816 390 aa19.27■□□□□ 0.68
TRAPPC11-204ENST00000505676 PHLPP2Q6ZVD8 1323 aa19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 RIOK3O14730 519 aaKnown RBP19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 IRF2BP1Q8IU81 584 aa19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 TMTC1Q8IUR5 882 aa19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 SPICE1Q8N0Z3 855 aa19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 MAP3K20Q9NYL2 800 aaKnown RBP19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 MAPK8IP1Q9UQF2 711 aa19.27■□□□□ 0.67
TRAPPC11-204ENST00000505676 NFKBIEO00221 500 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 CTIFO43310 598 aaKnown RBP19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 ZBTB7AO95365 584 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 FDX1P10109 184 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 RPA1P27694 616 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 PRR16Q569H4 304 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIAA0895Q8NCT3 520 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 DUSP9Q99956 384 aaKnown RBP19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 TAB2Q9NYJ8 693 aa19.26■□□□□ 0.67
TRAPPC11-204ENST00000505676 OPLAHO14841 1288 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 CTNND1O60716 968 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 ZNF76P36508 570 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 UBXN1Q04323 297 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 RBL2Q08999 1139 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 RASA3Q14644 834 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 MB21D1Q8N884 522 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 LENG9Q96B70 501 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 POLR3CQ9BUI4 534 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIAA1683Q9H0B3 1180 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 TRIM49BA6NDI0 452 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 ADKP55263 362 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 ETF1P62495 437 aaKnown RBP19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 SPIRE1Q08AE8 756 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 NBPF9Q3BBW0 867 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 VPS16Q9H269 839 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 PPP2R2CQ9Y2T4 447 aa19.25■□□□□ 0.67
TRAPPC11-204ENST00000505676 CCDC175P0C221 793 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 PLA2G4BP0C869 781 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 PMS1P54277 932 aaKnown RBP19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 GHRHRQ02643 423 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 ZNF507Q8TCN5 953 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 FEZ1Q99689 392 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 NUDT12Q9BQG2 462 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 PHF20L1A8MW92 1017 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 FZD9O00144 591 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 GYPCP04921 128 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 PTGER2P43116 358 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 ANKRD40Q6AI12 368 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 MCF2L2Q86YR7 1114 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIFC2Q96AC6 838 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 DNAJC19Q96DA6 116 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 TUBGCP2Q9BSJ2 902 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 KIAA1024Q9UPX6 916 aa19.24■□□□□ 0.67
TRAPPC11-204ENST00000505676 ICAM1P05362 532 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 FCER1AP12319 257 aa19.23■□□□□ 0.67
TRAPPC11-204ENST00000505676 USP14P54578 494 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms