RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 LINC01559Q495D7 138 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 ARMCX2Q7L311 632 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 DEFB128Q7Z7B8 93 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
VCAN-206ENST00000505615 ALDH8A1Q9H2A2 487 aaPredicted RBP8.48□□□□□ -1.05
VCAN-206ENST00000505615 ALG13Q9NP73 1137 aaKnown RBP8.48□□□□□ -1.05
VCAN-206ENST00000505615 NLRC5Q86WI3 1866 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 ZNF536O15090 1300 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 SPTBN2O15020 2390 aa8.48□□□□□ -1.05
VCAN-206ENST00000505615 ACACBO00763 2458 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 CEP250Q9BV73 2442 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 CYP2D6P10635 497 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 CYP2C9P11712 490 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 AKR1B1P15121 316 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 TIMP2P16035 220 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 VARSP26640 1264 aaKnown RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 KCNH2Q12809 1159 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 TCF15Q12870 199 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 NNTQ13423 1086 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 FSCN1Q16658 493 aaKnown RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 TTC39AQ5SRH9 613 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 DESI1Q6ICB0 168 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 SNRNP48Q6IEG0 339 aaKnown RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 MRPL14Q6P1L8 145 aaKnown RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 TLK2Q86UE8 772 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 CERS3Q8IU89 383 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 NEK9Q8TD19 979 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 BAP1Q92560 729 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 ZNF512BQ96KM6 892 aaPredicted RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 TEX13BQ9BXU2 312 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 SEZ6LQ9BYH1 1024 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
VCAN-206ENST00000505615 TRMT13Q9NUP7 481 aaKnown RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 KMT2BQ9UMN6 2715 aaPredicted RBP8.47□□□□□ -1.05
VCAN-206ENST00000505615 ZNF292O60281 2723 aa8.46□□□□□ -1.05
VCAN-206ENST00000505615 IDH1O75874 414 aaKnown RBP8.46□□□□□ -1.06
VCAN-206ENST00000505615 POLR3DP05423 398 aaPredicted RBP8.46□□□□□ -1.06
VCAN-206ENST00000505615 ERVK-21P61565 698 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 TNNI3KQ59H18 835 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 FAM83BQ5T0W9 1011 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 CCDC144CPQ8IYA2 1237 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 DDX11Q96FC9 970 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 DYNLL2Q96FJ2 89 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 MFSD14AQ96MC6 490 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 SH2D4AQ9H788 454 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 SUGCTQ9HAC7 445 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 GPR108Q9NPR9 543 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 HDAC5Q9UQL6 1122 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 FPGT-TNNI3KV9GXZ4 949 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 COL4A6Q14031 1691 aa8.46□□□□□ -1.06
VCAN-206ENST00000505615 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 PNMA6EA0A0J9YXQ4 647 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 KIF28PB7ZC32 967 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 H3BQ06 376 aaPredicted RBP8.45□□□□□ -1.06
VCAN-206ENST00000505615 ATP2A1O14983 1001 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 ACTN1P12814 892 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 RFC2P35250 354 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 IRS1P35568 1242 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 WDR5P61964 334 aaKnown RBP8.45□□□□□ -1.06
VCAN-206ENST00000505615 TNFAIP2Q03169 654 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 COL19A1Q14993 1142 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 TMEM63BQ5T3F8 832 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 TMCO2Q7Z6W1 182 aaPredicted RBP8.45□□□□□ -1.06
VCAN-206ENST00000505615 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 MCM9Q9NXL9 1143 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 TLR7Q9NYK1 1049 aaKnown RBP8.45□□□□□ -1.06
VCAN-206ENST00000505615 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
VCAN-206ENST00000505615 TNKSO95271 1327 aa8.45□□□□□ -1.06
VCAN-206ENST00000505615 MYH7P12883 1935 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 LINC01553A4QN01 128 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 BAIAP3O94812 1187 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 ADH1CP00326 375 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 EEF2P13639 858 aaKnown RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 NDUFV2P19404 249 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 DEFB103AP81534 67 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 CNTN2Q02246 1040 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 HERC4Q5GLZ8 1057 aaPredicted RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 CCDC158Q5M9N0 1113 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 BMP8AQ7Z5Y6 402 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 ADHFE1Q8IWW8 467 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.44□□□□□ -1.06
VCAN-206ENST00000505615 TGS1Q96RS0 853 aaKnown RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 SLF1Q9BQI6 1058 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 ANTXR1Q9H6X2 564 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 DCP1AQ9NPI6 582 aaPredicted RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 FAM86C1Q9NVL1 165 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 PRKAG3Q9UGI9 489 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 DBNLQ9UJU6 430 aaKnown RBP8.44□□□□□ -1.06
VCAN-206ENST00000505615 MTUS1Q9ULD2 1270 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 RALGAPA2Q2PPJ7 1873 aa8.44□□□□□ -1.06
VCAN-206ENST00000505615 RBAK-RBAKDNI3L0D1 243 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 DYNC1LI2O43237 492 aaPredicted RBP8.43□□□□□ -1.06
VCAN-206ENST00000505615 ZEB2O60315 1214 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 IQCF3P0C7M6 154 aa8.43□□□□□ -1.06
VCAN-206ENST00000505615 SUPT20HL2P0C7V6 817 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms