RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 KCNJ6P48051 423 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 LIG3P49916 1009 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CLNS1AP54105 237 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 POLR2FP61218 127 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 DCAF7P61962 342 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 FOXK2Q01167 660 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CENPCQ03188 943 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 AP1B1Q10567 949 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 MAP7Q14244 749 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CTC1Q2NKJ3 1217 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 WSCD2Q2TBF2 565 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CCDC38Q502W7 563 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 MUM1L1Q5H9M0 696 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 HGSNATQ68CP4 663 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 DSTYKQ6XUX3 929 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 RAPH1Q70E73 1250 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 DNAJB7Q7Z6W7 309 aaPredicted RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 SLC9B2Q86UD5 537 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 NLRP8Q86W28 1048 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TRIM42Q8IWZ5 723 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 COLGALT2Q8IYK4 626 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 RNF168Q8IYW5 571 aaPredicted RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 TRMT2AQ8IZ69 625 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 ESX1Q8N693 406 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 C1orf74Q96LT6 269 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 MTFR1LQ9H019 292 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 VPS11Q9H270 941 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 IFT22Q9H7X7 185 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 NMRK2Q9NPI5 230 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 DUSP12Q9UNI6 340 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 PCDHGB6Q9Y5F9 930 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CCDC196A0A1B0GTZ2 297 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TISP43B9A030 160 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 B9A039 149 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 SLC27A2O14975 620 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 USP2O75604 605 aaPredicted RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 HSPA5P11021 654 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 MXI1P50539 228 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 EIF4A2Q14240 407 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 ANKRD1Q15327 319 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CLUL1Q15846 466 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 KDELC1Q6UW63 502 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 GK5Q6ZS86 529 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 ZNF540Q8NDQ6 660 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 SLC35G2Q8TBE7 412 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 FAM81BQ96LP2 452 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TAAR9Q96RI9 348 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TCHPQ9BT92 498 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 MENTQ9BUN1 341 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 DNAI2Q9GZS0 605 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
CDH9-202ENST00000505020 HPF1Q9NWY4 346 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 TRIM17Q9Y577 477 aa8.08□□□□□ -1.12
CDH9-202ENST00000505020 CASQ2O14958 399 aaPredicted RBP8.07□□□□□ -1.12
CDH9-202ENST00000505020 KPNA6O60684 536 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 CLASP2O75122 1294 aaKnown RBP8.07□□□□□ -1.12
CDH9-202ENST00000505020 INHAP05111 366 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 HSPA6P17066 643 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 POU3F2P20265 443 aaPredicted RBP8.07□□□□□ -1.12
CDH9-202ENST00000505020 HADHAP40939 763 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 UBXN1Q04323 297 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 INAVAQ3KP66 663 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 ANKDD1AQ495B1 522 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 HEATR4Q86WZ0 1026 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 TREML1Q86YW5 311 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 TMTC1Q8IUR5 882 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 CMTR2Q8IYT2 770 aaKnown RBP8.07□□□□□ -1.12
CDH9-202ENST00000505020 LRRC47Q8N1G4 583 aaKnown RBP8.07□□□□□ -1.12
CDH9-202ENST00000505020 ZNF619Q8N2I2 560 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 UCMAQ8WVF2 138 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 RUFY2Q8WXA3 655 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 KIF1BPQ96EK5 621 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 RIPOR3Q96MK2 946 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 SLC7A5P2Q9GIP4 190 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 GPRC5BQ9NZH0 403 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 SH3BGRL2Q9UJC5 107 aa8.07□□□□□ -1.12
CDH9-202ENST00000505020 USO1O60763 962 aaKnown RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 ABCB4P21439 1286 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 PPM1AP35813 382 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 PSMA6P60900 246 aaKnown RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 IFIT5Q13325 482 aaKnown RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 PPA1Q15181 289 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 TAF12Q16514 161 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 MMEL1Q495T6 779 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 SLC30A6Q6NXT4 461 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ZER1Q7Z7L7 766 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 TDRD7Q8NHU6 1098 aaKnown RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 UTP15Q8TED0 518 aaKnown RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 PPP1R16BQ96T49 567 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 SUV39H2Q9H5I1 410 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 PRDM5Q9NQX1 630 aaPredicted RBP8.06□□□□□ -1.12
CDH9-202ENST00000505020 TMOD4Q9NZQ9 345 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 ZNRF3Q9ULT6 936 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
CDH9-202ENST00000505020 A0A1W2PQH9 124 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms