RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FBXO2Q9UK22 296 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 ANKRD62A6NC57 917 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 TUBB4AP04350 444 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 MCM3P25205 808 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 HMGCS2P54868 508 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 ZNF579Q8NAF0 562 aaKnown RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 CEP170P1Q96L14 293 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 SNRNP48Q6IEG0 339 aaKnown RBP15.55■□□□□ 0.08
TCOF1-207ENST00000504761 LMBR1Q8WVP7 490 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 DNAI2Q9GZS0 605 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 EMILIN3Q9NT22 766 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 NOD1Q9Y239 953 aa15.55■□□□□ 0.08
TCOF1-207ENST00000504761 KNDC1Q76NI1 1749 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PRPF6O94906 941 aaKnown RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PPP2R3AQ06190 1150 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 RBL2Q08999 1139 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 VWA3BQ502W6 1294 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 DPP9Q86TI2 863 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 DHTKD1Q96HY7 919 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 SPON1Q9HCB6 807 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 CNTNAP5Q8WYK1 1306 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 ABCB4P21439 1286 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 ATP2C1P98194 919 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 FKBP3Q00688 224 aaKnown RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 GRIPAP1Q4V328 841 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 MAATS1Q7Z4T9 603 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 NACC1Q96RE7 527 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PPP2R2CQ9Y2T4 447 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 LIG4P49917 911 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PLCB3Q01970 1234 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 BRDTQ58F21 947 aaPredicted RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 CCDC50Q8IVM0 306 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PRPF38AQ8NAV1 312 aaKnown RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 IFT81Q8WYA0 676 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 SECISBP2LQ93073 1101 aaKnown RBP15.54■□□□□ 0.08
TCOF1-207ENST00000504761 OTUD5Q96G74 571 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 PLEKHA4Q9H4M7 779 aa15.54■□□□□ 0.08
TCOF1-207ENST00000504761 ABCB11O95342 1321 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 GOLGA6L10A0A0M3HER8 536 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 POTEFA5A3E0 1075 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 POTEIP0CG38 1075 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 GMPSP49915 693 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 POTEGQ6S5H5 508 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 POTEEQ6S8J3 1075 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 SLC10A4Q96EP9 437 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 ANKFY1Q9P2R3 1169 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 CCNE1P24864 410 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 ANGEL2Q5VTE6 544 aaKnown RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 METTL16Q86W50 562 aaKnown RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 TTC16Q8NEE8 873 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 TRIM6Q9C030 488 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 TSPYL1Q9H0U9 437 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 SLIT3O75094 1523 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 HNRNPDLO14979 420 aaKnown RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 AP3B2Q13367 1082 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 MTMR2Q13614 643 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 SH2D3AQ9BRG2 576 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 RNF146Q9NTX7 359 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 MED1Q15648 1581 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 GNA14O95837 355 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 CD19P15391 556 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 DMP1Q13316 513 aaPredicted RBP15.53■□□□□ 0.08
TCOF1-207ENST00000504761 MTERF2Q49AM1 385 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 NBPF11Q86T75 865 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 LDHDQ86WU2 507 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 POMGNT1Q8WZA1 660 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 HPS3Q969F9 1004 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 SERPINA10Q9UK55 444 aa15.53■□□□□ 0.08
TCOF1-207ENST00000504761 PRCPP42785 496 aa15.52■□□□□ 0.08
TCOF1-207ENST00000504761 BMS1Q14692 1282 aaKnown RBP15.52■□□□□ 0.08
TCOF1-207ENST00000504761 ELF2Q15723 593 aa15.52■□□□□ 0.08
TCOF1-207ENST00000504761 DDTLA6NHG4 134 aaPredicted RBP15.52■□□□□ 0.07
TCOF1-207ENST00000504761 SPOPO43791 374 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 PPM1KQ8N3J5 372 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 BANK1Q8NDB2 785 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 PLVAPQ9BX97 442 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 ENTPD3O75355 529 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 CNGA1P29973 690 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 SMC1AQ14683 1233 aaKnown RBP15.52■□□□□ 0.07
TCOF1-207ENST00000504761 ATP6V0A1Q93050 837 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 TMEM60Q9H2L4 133 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 CTTNBP2NLQ9P2B4 639 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 RWDD2AQ9UIY3 292 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 PNMA2Q9UL42 364 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 CEP83Q9Y592 693 aa15.52■□□□□ 0.07
TCOF1-207ENST00000504761 STAT1P42224 750 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 FAM47CQ5HY64 1035 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 U2AF1L4Q8WU68 220 aaKnown RBP15.51■□□□□ 0.07
TCOF1-207ENST00000504761 FAM151AQ8WW52 585 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 TRERF1Q96PN7 1200 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 FBXO28Q9NVF7 368 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 FEM1BQ9UK73 627 aa15.51■□□□□ 0.07
TCOF1-207ENST00000504761 EPN1Q9Y6I3 576 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-207ENST00000504761 ZNF500O60304 480 aaPredicted RBP15.51■□□□□ 0.07
TCOF1-207ENST00000504761 KRT31Q15323 416 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms