RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
HOXC9-202ENST00000504557 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 ANKRD33Q7Z3H0 272 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 BRF1Q92994 677 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 MAF1Q9H063 256 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 POLR3EQ9NVU0 708 aa16.44■□□□□ 0.22
HOXC9-202ENST00000504557 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
HOXC9-202ENST00000504557 A0A1W2PPC1 479 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
HOXC9-202ENST00000504557 GH1P01241 217 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 CCND2P30279 289 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 CDK7P50613 346 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 NKX3-2P78367 333 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 PURAQ00577 322 aaKnown RBP16.43■□□□□ 0.22
HOXC9-202ENST00000504557 UBE2SQ16763 222 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 FAM126BQ8IXS8 530 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 TRPV6Q9H1D0 765 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
HOXC9-202ENST00000504557 MAP3K20Q9NYL2 800 aaKnown RBP16.43■□□□□ 0.22
HOXC9-202ENST00000504557 RTEL1Q9NZ71 1219 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 SCN10AQ9Y5Y9 1956 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 GRIN2DO15399 1336 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 CNTNAP5Q8WYK1 1306 aa16.43■□□□□ 0.22
HOXC9-202ENST00000504557 KIAA0355O15063 1070 aa16.42■□□□□ 0.22
HOXC9-202ENST00000504557 GHRHRQ02643 423 aa16.42■□□□□ 0.22
HOXC9-202ENST00000504557 C9orf50Q5SZB4 431 aa16.42■□□□□ 0.22
HOXC9-202ENST00000504557 CCDC62Q6P9F0 684 aa16.42■□□□□ 0.22
HOXC9-202ENST00000504557 TOX2Q96NM4 488 aa16.42■□□□□ 0.22
HOXC9-202ENST00000504557 MTG1Q9BT17 334 aaPredicted RBP16.42■□□□□ 0.22
HOXC9-202ENST00000504557 B4GALT4O60513 344 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 PPFIA3O75145 1194 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 RPS6KB1P23443 525 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 CDC27P30260 824 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
HOXC9-202ENST00000504557 FPGSQ05932 587 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 ARHGAP1Q07960 439 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 SHHQ15465 462 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
HOXC9-202ENST00000504557 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 KCNB2Q92953 911 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 PSTPIP2Q9H939 334 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
HOXC9-202ENST00000504557 V9GY48 417 aaPredicted RBP16.41■□□□□ 0.22
HOXC9-202ENST00000504557 SCN5AQ14524 2016 aa16.41■□□□□ 0.22
HOXC9-202ENST00000504557 RGS20O76081 388 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 MMP3P08254 477 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 PSMA5P28066 241 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 CYP2C18P33260 490 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 NAPAP54920 295 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 NBPF20Q3BBV1 942 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
HOXC9-202ENST00000504557 TRMT13Q9NUP7 481 aaKnown RBP16.4■□□□□ 0.22
HOXC9-202ENST00000504557 TBX21Q9UL17 535 aa16.4■□□□□ 0.22
HOXC9-202ENST00000504557 A6NJR5 290 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 MEIS2O14770 477 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 GGPS1O95749 300 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 TIMP1P01033 207 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 ZNF286BP0CG31 522 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 CYP2C9P11712 490 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
HOXC9-202ENST00000504557 EPHB4P54760 987 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 ALG1Q9BT22 464 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
HOXC9-202ENST00000504557 ALDH8A1Q9H2A2 487 aaPredicted RBP16.39■□□□□ 0.21
HOXC9-202ENST00000504557 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
HOXC9-202ENST00000504557 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 CD4P01730 458 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 ACRP10323 421 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 CSF2RAP15509 400 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 UBA1P22314 1058 aaKnown RBP16.38■□□□□ 0.21
HOXC9-202ENST00000504557 CCL23P55773 120 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
HOXC9-202ENST00000504557 MRPS9P82933 396 aaKnown RBP16.38■□□□□ 0.21
HOXC9-202ENST00000504557 SP4Q02446 784 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 DGKDQ16760 1214 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 SLC43A3Q8NBI5 491 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 SPATA33Q96N06 139 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 BCAS3Q9H6U6 928 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
HOXC9-202ENST00000504557 PKD2L1Q9P0L9 805 aa16.38■□□□□ 0.21
HOXC9-202ENST00000504557 SPDYE3A6NKU9 549 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 KPNA6O60684 536 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 SP2Q02086 613 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 LAMC2Q13753 1193 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 GNPTABQ3T906 1256 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 TYW1BQ6NUM6 668 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 Q7L0L9 218 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
HOXC9-202ENST00000504557 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
HOXC9-202ENST00000504557 NOD1Q9Y239 953 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms