RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 TCP11L2Q8N4U5 519 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 NGEFQ8N5V2 710 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 PDZD8Q8NEN9 1154 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 COG3Q96JB2 828 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 ZSWIM4Q9H7M6 989 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 RAPGEFL1Q9UHV5 662 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
HMGCR-204ENST00000504466 UPK3BL1B0FP48 263 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 UPK3BL2E5RIL1 263 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 U2SURPO15042 1029 aaKnown RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 KLF4O43474 513 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 TMEM253P0C7T8 217 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 PLCG1P19174 1290 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 IRX6P78412 446 aaPredicted RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.331e-6■■■■■ 27.8
HMGCR-204ENST00000504466 RAB33AQ14088 237 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 RRS1Q15050 365 aaKnown RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 ERICH6BQ5W0A0 696 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 LSRQ86X29 649 aaPredicted RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 LILRA2Q8N149 483 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 HNRNPLLQ8WVV9 542 aaKnown RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 KCNK12Q9HB15 430 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 SIRPGQ9P1W8 387 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 DUSP13Q9UII6 198 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 ZNF281Q9Y2X9 895 aa6.77□□□□□ -1.33
HMGCR-204ENST00000504466 XIRP1Q702N8 1843 aaKnown RBP6.77□□□□□ -1.33
HMGCR-204ENST00000504466 LRRC7Q96NW7 1537 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 RGPD1P0DJD0 1748 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 MEIS3P2A8K0S8 358 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 SERINC3Q13530 473 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 NFE2L2Q16236 605 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 KCNA10Q16322 511 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 FAM169BQ8N8A8 192 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 FAM13CQ8NE31 585 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
HMGCR-204ENST00000504466 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 REV1Q9UBZ9 1251 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 RCAN3Q9UKA8 241 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 RRP7AQ9Y3A4 280 aaKnown RBP6.76□□□□□ -1.33
HMGCR-204ENST00000504466 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
HMGCR-204ENST00000504466 ETV2O00321 342 aaPredicted RBP6.75□□□□□ -1.33
HMGCR-204ENST00000504466 TMPOP42166 694 aaKnown RBP6.75□□□□□ -1.33
HMGCR-204ENST00000504466 EGR3Q06889 387 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 ATG14Q6ZNE5 492 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 IRF2BP1Q8IU81 584 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 MKL1Q969V6 931 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 VWCEQ96DN2 955 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 ORAI2Q96SN7 254 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 TM9SF2Q99805 663 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 RNF32Q9H0A6 362 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 ACTR10Q9NZ32 417 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 GMIPQ9P107 970 aa6.75□□□□□ -1.33
HMGCR-204ENST00000504466 TRPM3Q9HCF6 1732 aaPredicted RBP6.75□□□□□ -1.33
HMGCR-204ENST00000504466 C1orf167Q5SNV9 1468 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 TMEM94Q12767 1356 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 FITM1A5D6W6 292 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 NPIPB6E9PJ23 425 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 LRRN2O75325 713 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 TRHRP34981 398 aaPredicted RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 CASP7P55210 303 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 RRP1P56182 461 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 EIF4A2Q14240 407 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 BMS1Q14692 1282 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 TTLL10Q6ZVT0 673 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 OXR1Q8N573 874 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 C19orf47Q8N9M1 422 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 PHACTR3Q96KR7 559 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 ASPNQ9BXN1 380 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 PIF1Q9H611 641 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 ANTXR1Q9H6X2 564 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 C19orf44Q9H6X5 657 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 SMG5Q9UPR3 1016 aaKnown RBP6.74□□□□□ -1.33
HMGCR-204ENST00000504466 PCDHA11Q9Y5I1 949 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 MST1RQ04912 1400 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 DLG5Q8TDM6 1919 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 MAP3K19Q56UN5 1328 aa6.74□□□□□ -1.33
HMGCR-204ENST00000504466 SLC22A31A6NKX4 558 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
HMGCR-204ENST00000504466 SMARCA5O60264 1052 aaPredicted RBP6.73□□□□□ -1.33
HMGCR-204ENST00000504466 GUCY2CP25092 1073 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 PPP2R5EQ16537 467 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 TIGD5Q53EQ6 642 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 HSP90AB2PQ58FF8 381 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 OVOS1Q6IE37 1185 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 GIMAP6Q6P9H5 292 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 RUFY4Q6ZNE9 571 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 TAB3Q8N5C8 712 aaPredicted RBP6.73□□□□□ -1.33
HMGCR-204ENST00000504466 MRFAP1L1Q96HT8 127 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 KREMEN1Q96MU8 473 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 SLC6A17Q9H1V8 727 aa6.73□□□□□ -1.33
HMGCR-204ENST00000504466 SBNO1A3KN83 1393 aa6.72□□□□□ -1.33
HMGCR-204ENST00000504466 NFAT5O94916 1531 aa6.72□□□□□ -1.33
HMGCR-204ENST00000504466 KIF1AQ12756 1690 aa6.72□□□□□ -1.33
HMGCR-204ENST00000504466 PEX10O60683 326 aa6.72□□□□□ -1.33
HMGCR-204ENST00000504466 HMOX1P09601 288 aa6.72□□□□□ -1.33
HMGCR-204ENST00000504466 PRKAR2BP31323 418 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms