RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 VSIG10LQ86VR7 867 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 RAB11FIP4Q86YS3 637 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 KLHDC9Q8NEP7 349 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 OR6J1Q8NGC5 347 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 ZSCAN31Q96LW9 406 aaPredicted RBP8.94□□□□□ -0.98
SKP2-203ENST00000504386 TAAR1Q96RJ0 339 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 STARD7Q9NQZ5 370 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 GNEQ9Y223 722 aaKnown RBP8.94□□□□□ -0.98
SKP2-203ENST00000504386 MRVI1Q9Y6F6 885 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 FRMPD4Q14CM0 1322 aa8.94□□□□□ -0.98
SKP2-203ENST00000504386 MYH6P13533 1939 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 A0A0U1RQG5 324 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 SMCO2A6NFE2 343 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 DCDC2CA8MYV0 355 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 OPLAHO14841 1288 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 DYNC1LI2O43237 492 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 FIBPO43427 364 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 MYCLP12524 364 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 SMPD1P17405 629 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 CDC27P30260 824 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 HOXA13P31271 388 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 ADD1P35611 737 aaKnown RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 MCM2P49736 904 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 RBM25P49756 843 aaKnown RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 FUT2Q10981 343 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 LAMC2Q13753 1193 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 TOB2Q14106 344 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 RABEP1Q15276 862 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 KCNA10Q16322 511 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 SLC35G1Q2M3R5 365 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 C8orf34Q49A92 452 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 WWC2Q6AWC2 1192 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 TAPT1Q6NXT6 567 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 REXO1Q8N1G1 1221 aaKnown RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 DIS3LQ8TF46 1054 aaKnown RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 EMID1Q96A84 441 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 GPRASP2Q96D09 838 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 TOX2Q96NM4 488 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 KATNAL1Q9BW62 490 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 SLC26A6Q9BXS9 759 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 BRMS1Q9HCU9 246 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 SH2B1Q9NRF2 756 aaPredicted RBP8.93□□□□□ -0.98
SKP2-203ENST00000504386 TCEAL9Q9UHQ7 104 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 KIF3AQ9Y496 699 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 ASTN1O14525 1302 aa8.93□□□□□ -0.98
SKP2-203ENST00000504386 STK36Q9NRP7 1315 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 A0A1W2PQ45 241 aaPredicted RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 A0A1W2PQY0 241 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 A6NJR5 290 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 STXBP3O00186 592 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 MEIS2O14770 477 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 PFKFB2O60825 505 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 ASGR1P07306 291 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 SUPT20HL2P0C7V6 817 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 MNX1P50219 401 aaPredicted RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 SNX17Q15036 470 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 DGKDQ16760 1214 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 ANO1Q5XXA6 986 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 SLC39A5Q6ZMH5 540 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 SEPT14Q6ZU15 432 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 DHX37Q8IY37 1157 aaKnown RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 CMTR1Q8N1G2 835 aaKnown RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 TBC1D5Q92609 795 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 GPKOWQ92917 476 aaPredicted RBP eCLIP8.92□□□□□ -0.98
SKP2-203ENST00000504386 TNPO1Q92973 898 aaKnown RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 INPP4AQ96PE3 977 aaPredicted RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 NAP1L4Q99733 375 aaKnown RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 LBHD1Q9BQE6 289 aaPredicted RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 SENP7Q9BQF6 1050 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 ZMYND12Q9H0C1 365 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 MLXIPQ9HAP2 919 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 FAM217BQ9NTX9 383 aaPredicted RBP8.92□□□□□ -0.98
SKP2-203ENST00000504386 LIMCH1Q9UPQ0 1083 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 PDE4DIPQ5VU43 2346 aa8.92□□□□□ -0.98
SKP2-203ENST00000504386 A0A1W2PPC1 479 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 NOP56O00567 594 aaKnown RBP8.91□□□□□ -0.98
SKP2-203ENST00000504386 ICAM3P32942 547 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 ZNF76P36508 570 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 AK2P54819 239 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 RTP1P59025 263 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 NLRP5P59047 1200 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 SETQ01105 290 aaPredicted RBP8.91□□□□□ -0.98
SKP2-203ENST00000504386 PTPN11Q06124 597 aaPredicted RBP8.91□□□□□ -0.98
SKP2-203ENST00000504386 TRIM29Q14134 588 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 NTRK3Q16288 839 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 CCDC62Q6P9F0 684 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 USP17L6PQ6QN14 398 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 NIPA1Q7RTP0 329 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 ANKRD33Q7Z3H0 272 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 C7orf61Q8IZ16 206 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 PPTC7Q8NI37 304 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
SKP2-203ENST00000504386 MTG1Q9BT17 334 aaPredicted RBP8.91□□□□□ -0.98
SKP2-203ENST00000504386 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 COL20A1Q9P218 1284 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 PCDHA6Q9UN73 950 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 PCDHA8Q9Y5H6 950 aa8.91□□□□□ -0.98
SKP2-203ENST00000504386 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms