RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GBP2P32456 591 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 PSMC4P43686 418 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CCNG1P51959 295 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 TGFB2P61812 414 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 PLCB3Q01970 1234 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 IFIT5Q13325 482 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CWF19L2Q2TBE0 894 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 ATL3Q6DD88 541 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 BRSK1Q8TDC3 778 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 SDCCAG3Q96C92 435 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 ALG1Q9BT22 464 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 SUGCTQ9HAC7 445 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 NCOA5Q9HCD5 579 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 ATP8A2Q9NTI2 1148 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 GALNT8Q9NY28 637 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 MYO1AQ9UBC5 1043 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 TRMT112Q9UI30 125 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 L3MBTL1Q9Y468 752 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 NAV1Q8NEY1 1877 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 A0A087WWV3 80 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CTAGE15A4D2H0 777 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 OR5K4A6NMS3 321 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CTAGE8P0CG41 777 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 GJC1P36383 396 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 ETFBP38117 255 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 SARSP49591 514 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 METAP2P50579 478 aaKnown RBP eCLIP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 FOXK2Q01167 660 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 ACTN3Q08043 901 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 SSRP1Q08945 709 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 PTPN21Q16825 1174 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 TRIM71Q2Q1W2 868 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 PARP10Q53GL7 1025 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 TMCO4Q5TGY1 634 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 E4F1Q66K89 784 aaPredicted RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 FAM171BQ6P995 826 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CTAGE6Q86UF2 777 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 LRRC49Q8IUZ0 686 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CTAGE4Q8IX94 777 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CPSF7Q8N684 471 aaKnown RBP4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 STAMQ92783 540 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 CARD6Q9BX69 1037 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 IFT122Q9HBG6 1241 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 IP6K2Q9UHH9 426 aa4.05□□□□□ -1.76
PCDH11X-208ENST00000504220 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 DPPA5A6NC42 116 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 OPLAHO14841 1288 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 LIN7AO14910 233 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 KCNQ2O43526 872 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PRC1O43663 620 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 VAMP4O75379 141 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 LDHAP00338 332 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 EZRP15311 586 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ATP4AP20648 1035 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 GEMIN4P57678 1058 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 EVCP57679 992 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 BPIFB3P59826 476 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 B2MP61769 119 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 GPSM2P81274 684 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 COG2Q14746 738 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 TMEM53Q6P2H8 277 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 C16orf54Q6UWD8 224 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC129Q6ZRS4 1044 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SMIM5Q71RC9 77 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CCDC80Q76M96 950 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CABP7Q86V35 215 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ERICH1Q86X53 443 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PLEKHM2Q8IWE5 1019 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 FAM20CQ8IXL6 584 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SYCP3Q8IZU3 236 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CADM3Q8N126 398 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 RIN3Q8TB24 985 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 FBF1Q8TES7 1133 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 GIMAP5Q96F15 307 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 EEF2KMTQ96G04 330 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ZKSCAN3Q9BRR0 538 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PDGFDQ9GZP0 370 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 GLT8D2Q9H1C3 349 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 BICC1Q9H694 974 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ANKZF1Q9H8Y5 726 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 AASDHPPTQ9NRN7 309 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 UBAP1Q9NZ09 502 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CHPF2Q9P2E5 772 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 ACAD8Q9UKU7 415 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 TRPC6Q9Y210 931 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 FAM169AQ9Y6X4 670 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 KIAA1551Q9HCM1 1747 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 PRSS47A8MTI9 375 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 TRIM77I1YAP6 450 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 LINC01387J3KSC0 135 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 MTRF1O75570 445 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 RGS20O76081 388 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 SLC16A2P36021 539 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 IGHMBP2P38935 993 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CCT6AP40227 531 aaKnown RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 AMPD3Q01432 767 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 NMIQ13287 307 aaPredicted RBP4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 LMBR1LQ6UX01 489 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 CYP26C1Q6V0L0 522 aa4.04□□□□□ -1.76
PCDH11X-208ENST00000504220 G2E3Q7L622 706 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms