RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 PGM5Q15124 567 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 LY6KQ17RY6 165 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 DHX32Q7L7V1 743 aaKnown RBP21.14■□□□□ 0.97
RNF4-204ENST00000503659 KCNB2Q92953 911 aa21.14■□□□□ 0.97
RNF4-204ENST00000503659 RRP36Q96EU6 259 aaKnown RBP21.14■□□□□ 0.97
RNF4-204ENST00000503659 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 TMEM265A0A087WTH1 108 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 B4GALT4O60513 344 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 TMTC3Q6ZXV5 915 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 FCHSD1Q86WN1 690 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 MICU3Q86XE3 530 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 TMEM199Q8N511 208 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 FANCBQ8NB91 859 aa21.13■□□□□ 0.97
RNF4-204ENST00000503659 MTG1Q9BT17 334 aaPredicted RBP21.13■□□□□ 0.97
RNF4-204ENST00000503659 GH1P01241 217 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 KRT32Q14532 448 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 APOA5Q6Q788 366 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 VSIG10LQ86VR7 867 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 GUCD1Q96NT3 240 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 TRPV6Q9H1D0 765 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 DDX41Q9UJV9 622 aaKnown RBP21.12■□□□□ 0.97
RNF4-204ENST00000503659 BRPF3Q9ULD4 1205 aa21.12■□□□□ 0.97
RNF4-204ENST00000503659 DOCK5Q9H7D0 1870 aa21.11■□□□□ 0.97
RNF4-204ENST00000503659 MMP3P08254 477 aa21.11■□□□□ 0.97
RNF4-204ENST00000503659 MYCLP12524 364 aaPredicted RBP21.11■□□□□ 0.97
RNF4-204ENST00000503659 HSPA4P34932 840 aa21.11■□□□□ 0.97
RNF4-204ENST00000503659 BRDTQ58F21 947 aaPredicted RBP21.11■□□□□ 0.97
RNF4-204ENST00000503659 AFG1LQ8WV93 481 aa21.11■□□□□ 0.97
RNF4-204ENST00000503659 PPP1R12CQ9BZL4 782 aa21.11■□□□□ 0.97
RNF4-204ENST00000503659 ALDH8A1Q9H2A2 487 aaPredicted RBP21.11■□□□□ 0.97
RNF4-204ENST00000503659 SEC63Q9UGP8 760 aaKnown RBP21.11■□□□□ 0.97
RNF4-204ENST00000503659 UMODL1Q5DID0 1318 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.1■□□□□ 0.97
RNF4-204ENST00000503659 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.1■□□□□ 0.97
RNF4-204ENST00000503659 hCG_1642624A0A1W2PR95 340 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 KPNA6O60684 536 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 CPA1P15085 419 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 EMID1Q96A84 441 aaPredicted RBP21.1■□□□□ 0.97
RNF4-204ENST00000503659 ZFP91Q96JP5 570 aaPredicted RBP21.1■□□□□ 0.97
RNF4-204ENST00000503659 SEMA6BQ9H3T3 888 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 MRVI1Q9Y6F6 885 aa21.1■□□□□ 0.97
RNF4-204ENST00000503659 TANC1Q9C0D5 1861 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 CNTNAP5Q8WYK1 1306 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 PIK3CDO00329 1044 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 MEIS2O14770 477 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 CCND2P30279 289 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 NBPF20Q3BBV1 942 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 PSRC1Q6PGN9 363 aaPredicted RBP21.09■□□□□ 0.97
RNF4-204ENST00000503659 CCDC82Q8N4S0 544 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 PPP1R13LQ8WUF5 828 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 TRMT13Q9NUP7 481 aaKnown RBP21.09■□□□□ 0.97
RNF4-204ENST00000503659 SNX14Q9Y5W7 946 aa21.09■□□□□ 0.97
RNF4-204ENST00000503659 HMGB1P09429 215 aaKnown RBP21.08■□□□□ 0.97
RNF4-204ENST00000503659 CSF2RAP15509 400 aa21.08■□□□□ 0.97
RNF4-204ENST00000503659 CYP2C18P33260 490 aa21.08■□□□□ 0.97
RNF4-204ENST00000503659 MRPS9P82933 396 aaKnown RBP21.08■□□□□ 0.97
RNF4-204ENST00000503659 USP17L6PQ6QN14 398 aa21.08■□□□□ 0.97
RNF4-204ENST00000503659 SYNE3Q6ZMZ3 975 aa21.08■□□□□ 0.97
RNF4-204ENST00000503659 GPKOWQ92917 476 aaPredicted RBP eCLIP21.08■□□□□ 0.97
RNF4-204ENST00000503659 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.08■□□□□ 0.973e-6■■□□□ 12.4
RNF4-204ENST00000503659 NOC4LQ9BVI4 516 aaKnown RBP21.08■□□□□ 0.97
RNF4-204ENST00000503659 HIPK3Q9H422 1215 aa21.08■□□□□ 0.97
RNF4-204ENST00000503659 ZBTB43O43298 467 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 FUT2Q10981 343 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 RTN1Q16799 776 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 TMEM240Q5SV17 173 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 RASIP1Q5U651 963 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 NFRKBQ6P4R8 1299 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 C16orf59Q7L2K0 433 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 PPTC7Q8NI37 304 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 KAT2BQ92831 832 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 FAM161BQ96MY7 647 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 JAKMIP1Q96N16 626 aaKnown RBP21.07■□□□□ 0.96
RNF4-204ENST00000503659 IL23AQ9NPF7 189 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 RBM28Q9NW13 759 aaKnown RBP21.07■□□□□ 0.96
RNF4-204ENST00000503659 PPP4R2Q9NY27 417 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 A0A0C4DFX4 3053 aa21.07■□□□□ 0.96
RNF4-204ENST00000503659 SCN5AQ14524 2016 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 KLF18A0A0U1RQI7 1052 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 REC8O95072 547 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 SUPT20HL2P0C7V6 817 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 UBA1P22314 1058 aaKnown RBP21.06■□□□□ 0.96
RNF4-204ENST00000503659 SP2Q02086 613 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 LAMC2Q13753 1193 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 MYSM1Q5VVJ2 828 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 KCNV1Q6PIU1 500 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 SMARCC2Q8TAQ2 1214 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 CDX2Q99626 313 aaPredicted RBP21.06■□□□□ 0.96
RNF4-204ENST00000503659 WNT8AQ9H1J5 351 aa21.06■□□□□ 0.96
RNF4-204ENST00000503659 FAM217BQ9NTX9 383 aaPredicted RBP21.06■□□□□ 0.96
RNF4-204ENST00000503659 CYP2C9P11712 490 aa21.05■□□□□ 0.96
RNF4-204ENST00000503659 HOXD8P13378 290 aaPredicted RBP21.05■□□□□ 0.96
RNF4-204ENST00000503659 DGKDQ16760 1214 aa21.05■□□□□ 0.96
RNF4-204ENST00000503659 FAM47CQ5HY64 1035 aa21.05■□□□□ 0.96
RNF4-204ENST00000503659 CELF3Q5SZQ8 465 aaKnown RBP21.05■□□□□ 0.96
RNF4-204ENST00000503659 DHX37Q8IY37 1157 aaKnown RBP21.05■□□□□ 0.96
RNF4-204ENST00000503659 CUL5Q93034 780 aa21.05■□□□□ 0.96
RNF4-204ENST00000503659 INPP4AQ96PE3 977 aaPredicted RBP21.05■□□□□ 0.96
RNF4-204ENST00000503659 MTIF3Q9H2K0 278 aaKnown RBP21.05■□□□□ 0.96
RNF4-204ENST00000503659 TTYH1Q9H313 450 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms