RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 ABHD10Q9NUJ1 306 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 SYNPO2Q9UMS6 1093 aa25.13■■□□□ 1.61
PCDH1-204ENST00000503492 SLU7O95391 586 aaKnown RBP25.12■■□□□ 1.61
PCDH1-204ENST00000503492 MMP14P50281 582 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 ARHGAP4P98171 946 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 ACER1Q8TDN7 264 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 MRPL44Q9H9J2 332 aaKnown RBP25.12■■□□□ 1.61
PCDH1-204ENST00000503492 PRR12Q9ULL5 1215 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 ADGRG1Q9Y653 693 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 OPLAHO14841 1288 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 CENPPQ6IPU0 288 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 MOXD1Q6UVY6 613 aa25.12■■□□□ 1.61
PCDH1-204ENST00000503492 A0A1W2PQC6 194 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 CCDC175P0C221 793 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 CDAN1Q8IWY9 1227 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 TUBGCP2Q9BSJ2 902 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 EHHADHQ08426 723 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 CNOT6LQ96LI5 555 aaKnown RBP25.11■■□□□ 1.61
PCDH1-204ENST00000503492 LRRC27Q9C0I9 530 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 ARHGEF10LQ9HCE6 1279 aa25.11■■□□□ 1.61
PCDH1-204ENST00000503492 PES1O00541 588 aaKnown RBP25.1■■□□□ 1.61
PCDH1-204ENST00000503492 IDEP14735 1019 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 ERVK-24P63145 666 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 MCTP2Q6DN12 878 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 VEZTQ9HBM0 779 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 ZBTB21Q9ULJ3 1066 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 TMX2Q9Y320 296 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 B4DLN1 442 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 PRKCSHP14314 528 aaPredicted RBP25.1■■□□□ 1.61
PCDH1-204ENST00000503492 KRT9P35527 623 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 DNAJC19Q96DA6 116 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 KDM3AQ9Y4C1 1321 aa25.1■■□□□ 1.61
PCDH1-204ENST00000503492 ETNPPLQ8TBG4 499 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 WDR24Q96S15 920 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 NT5C3AQ9H0P0 336 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 ZNRF3Q9ULT6 936 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 STAT3P40763 770 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 BAG6P46379 1132 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 DNM2P50570 870 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 PRR16Q569H4 304 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 TMTC1Q8IUR5 882 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 FAM114A1Q8IWE2 563 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 GUF1Q8N442 669 aaKnown RBP25.09■■□□□ 1.61
PCDH1-204ENST00000503492 TMEM39BQ9GZU3 492 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.09■■□□□ 1.61
PCDH1-204ENST00000503492 KIAA1024Q9UPX6 916 aa25.09■■□□□ 1.61
PCDH1-204ENST00000503492 V9GYY5 206 aaPredicted RBP25.09■■□□□ 1.61
PCDH1-204ENST00000503492 TTC26A0AVF1 554 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 SPDYE3A6NKU9 549 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 E9PMD0 336 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 FOSP01100 380 aaPredicted RBP25.08■■□□□ 1.61
PCDH1-204ENST00000503492 SREBF1P36956 1147 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 STAT2P52630 851 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 GNG11P61952 73 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 SLFN12Q8IYM2 578 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 SMCHD1A6NHR9 2005 aa25.08■■□□□ 1.61
PCDH1-204ENST00000503492 A0A0U1RQJ8 604 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 POTEB3A0JP26 581 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 POTECB2RU33 542 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 NKRFO15226 690 aaKnown RBP eCLIP25.08■■□□□ 1.6
PCDH1-204ENST00000503492 HOXA13P31271 388 aaPredicted RBP25.08■■□□□ 1.6
PCDH1-204ENST00000503492 Q4G0T1 1027 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 FAM83BQ5T0W9 1011 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 POTEBQ6S5H4 581 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 NIM1KQ8IY84 436 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 ATRIPQ8WXE1 791 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 LENG9Q96B70 501 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 VPS33BQ9H267 617 aa25.08■■□□□ 1.6
PCDH1-204ENST00000503492 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.08■■□□□ 1.6
PCDH1-204ENST00000503492 SPIRE1Q08AE8 756 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 PDCL2Q8N4E4 241 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 MTMR14Q8NCE2 650 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 LRRN4CLQ8ND94 238 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 GLIS3Q8NEA6 775 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 FAM86B1E9PN63 330 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 FAM86B2P0C5J1 330 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 PSMD2Q13200 908 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 MIIPQ5JXC2 388 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 FKBP1CQ5VVH2 108 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 AGBL3Q8NEM8 1001 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 GOPCQ9HD26 462 aa25.07■■□□□ 1.6
PCDH1-204ENST00000503492 MED24O75448 989 aa25.06■■□□□ 1.6
PCDH1-204ENST00000503492 MTIF2P46199 727 aaKnown RBP25.06■■□□□ 1.6
PCDH1-204ENST00000503492 COASYQ13057 564 aa25.06■■□□□ 1.6
PCDH1-204ENST00000503492 SF3B2Q13435 895 aaKnown RBP25.06■■□□□ 1.6
PCDH1-204ENST00000503492 CYP26C1Q6V0L0 522 aa25.06■■□□□ 1.6
PCDH1-204ENST00000503492 MIGA2Q7L4E1 593 aa25.06■■□□□ 1.6
PCDH1-204ENST00000503492 SLC16A10Q8TF71 515 aa25.06■■□□□ 1.6
PCDH1-204ENST00000503492 URI1O94763 535 aaPredicted RBP25.05■■□□□ 1.6
PCDH1-204ENST00000503492 SSBP05455 408 aaKnown RBP eCLIP25.05■■□□□ 1.6
PCDH1-204ENST00000503492 LRRC41Q15345 812 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 TBX3O15119 743 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 SLC26A4O43511 780 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 TBC1D12O60347 775 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 PLA2G4BP0C869 781 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 CASQ1P31415 396 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 CXCL9Q07325 125 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 TBC1D8BQ0IIM8 1120 aa25.05■■□□□ 1.6
PCDH1-204ENST00000503492 NOC4LQ9BVI4 516 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms