RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 HDLBPQ00341 1268 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 SF3B3Q15393 1217 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 DLGAP5Q15398 846 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 LONRF3Q496Y0 759 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 TMTC3Q6ZXV5 915 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 UNC13DQ70J99 1090 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 INTS8Q75QN2 995 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 NIM1KQ8IY84 436 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PAF1Q8N7H5 531 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 MIGA1Q8NAN2 632 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 TTLL11Q8NHH1 800 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 VIPAS39Q9H9C1 493 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 MAP3K20Q9NYL2 800 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 FBXO40Q9UH90 709 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ANAPC4Q9UJX5 808 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PCDHA5Q9Y5H7 936 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PHIPQ8WWQ0 1821 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PNMA6FA0A0J9YX94 578 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PODXLO00592 558 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 EXOC3O60645 756 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 CSF1RP07333 972 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 LIG1P18858 919 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 FBLN1P23142 703 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ATP11AP98196 1134 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 NNTQ13423 1086 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ZNF772Q68DY9 489 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 TRIM72Q6ZMU5 477 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 TMEM179Q6ZVK1 233 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 BZW1Q7L1Q6 419 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 MB21D2Q8IYB1 491 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ANKRD35Q8N283 1001 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 HVCN1Q96D96 273 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 CARD6Q9BX69 1037 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 CCDC113Q9H0I3 377 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 AZI2Q9H6S1 392 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ZNF277Q9NRM2 450 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PI4KBQ9UBF8 816 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ADD3Q9UEY8 706 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PALD1Q9ULE6 856 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ZNF233A6NK53 670 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 IPO5O00410 1097 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PFDN6O15212 129 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 JAK2O60674 1132 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 HSPA8P11142 646 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 JAK3P52333 1124 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 BIRC3Q13489 604 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 CUL4BQ13620 913 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PFKFB3Q16875 520 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 DENND2CQ68D51 928 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 FOXR2Q6PJQ5 311 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 SAMD1Q6SPF0 538 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 MOXD1Q6UVY6 613 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 SYDE1Q6ZW31 735 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PHLDB2Q86SQ0 1253 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 PLA2G4DQ86XP0 818 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 MAP7D3Q8IWC1 876 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 LMNTD2Q8IXW0 634 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 SRRM1Q8IYB3 904 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 RTKN2Q8IZC4 609 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 GUF1Q8N442 669 aaKnown RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 GTF3C2Q8WUA4 911 aaPredicted RBP5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ATRIPQ8WXE1 791 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 FAM167AQ96KS9 214 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 ACCSQ96QU6 501 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 VPS16Q9H269 839 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 LZTFL1Q9NQ48 299 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 TFCP2L1Q9NZI6 479 aa5.2□□□□□ -1.58
NDFIP1-202ENST00000503388 GOLGA8CPA6NN73 597 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 GADD45BO75293 160 aaPredicted RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 CIB2O75838 187 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 ATP5HO75947 161 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 TXKP42681 527 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 CRKLP46109 303 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 KPNA2P52292 529 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 EXOSC10Q01780 885 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 PTGDRQ13258 359 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 GRM4Q14833 912 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 TSNAXIP1Q2TAA8 658 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 GSTA5Q7RTV2 222 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 RASEFQ8IZ41 740 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 SMC1BQ8NDV3 1235 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 DHX38Q92620 1227 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 TUBGCP2Q9BSJ2 902 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 VCXQ9H320 206 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 C1orf112Q9NSG2 853 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 PANK4Q9NVE7 773 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 SERPINB13Q9UIV8 391 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 FAN1Q9Y2M0 1017 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 NDUFAB1O14561 156 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 MED7O43513 233 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 HNRNPCL1O60812 293 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 LUC7L3O95232 432 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 AFPP02771 609 aaKnown RBP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 TROVE2P10155 538 aaKnown RBP eCLIP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 U2AF2P26368 475 aaKnown RBP eCLIP5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 SFNP31947 248 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 NDUFA8P51970 172 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 CDC42EP1Q00587 391 aa5.19□□□□□ -1.58
NDFIP1-202ENST00000503388 TAP1Q03518 808 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms