RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SEZ6LQ9BYH1 1024 aa18.86■□□□□ 0.61
SCLT1-204ENST00000503215 PNMA6FA0A0J9YX94 578 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 MMP3P08254 477 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 RXRAP19793 462 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 DNAJB2P25686 324 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 NECTIN1Q15223 517 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
SCLT1-204ENST00000503215 CREB3L3Q68CJ9 461 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 OTOP2Q7RTS6 562 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 FCHSD1Q86WN1 690 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 RAB11FIP4Q86YS3 637 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 HERVK_113Q902F9 699 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 GPKOWQ92917 476 aaPredicted RBP eCLIP18.85■□□□□ 0.61
SCLT1-204ENST00000503215 LRRC2Q9BYS8 371 aa18.85■□□□□ 0.61
SCLT1-204ENST00000503215 KPNA6O60684 536 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 FGBP02675 491 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 GRIN2CQ14957 1233 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 PGM5Q15124 567 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 NFRKBQ6P4R8 1299 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 PSRC1Q6PGN9 363 aaPredicted RBP18.84■□□□□ 0.61
SCLT1-204ENST00000503215 VSIG10LQ86VR7 867 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 CMTR1Q8N1G2 835 aaKnown RBP18.84■□□□□ 0.61
SCLT1-204ENST00000503215 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 BCAS3Q9H6U6 928 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
SCLT1-204ENST00000503215 GCOM1H8Y6P7 765 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-204ENST00000503215 SH2B2O14492 632 aaPredicted RBP18.83■□□□□ 0.61
SCLT1-204ENST00000503215 PLEKHA8P1O95397 391 aa18.83■□□□□ 0.61
SCLT1-204ENST00000503215 POLR2MP0CAP2 368 aa18.83■□□□□ 0.61
SCLT1-204ENST00000503215 SP2Q02086 613 aa18.83■□□□□ 0.61
SCLT1-204ENST00000503215 PBX4Q9BYU1 374 aa18.83■□□□□ 0.61
SCLT1-204ENST00000503215 MRVI1Q9Y6F6 885 aa18.83■□□□□ 0.61
SCLT1-204ENST00000503215 KIAA1217Q5T5P2 1943 aa18.83■□□□□ 0.6
SCLT1-204ENST00000503215 SUPT20HL2P0C7V6 817 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 MCM5P33992 734 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 CASC1Q6TDU7 716 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 CENPQQ7L2Z9 268 aaPredicted RBP18.82■□□□□ 0.6
SCLT1-204ENST00000503215 DEFB128Q7Z7B8 93 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 SRBD1Q8N5C6 995 aaKnown RBP18.82■□□□□ 0.6
SCLT1-204ENST00000503215 TIFAQ96CG3 184 aa18.82■□□□□ 0.6
SCLT1-204ENST00000503215 DDAH1O94760 285 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 GDF6Q6KF10 455 aaPredicted RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 ZNF576Q9H609 170 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 MAP3K20Q9NYL2 800 aaKnown RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 hCG_1642624A0A1W2PR95 340 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 ZNF286BP0CG31 522 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 MRPS9P82933 396 aaKnown RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 MYSM1Q5VVJ2 828 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 DHX37Q8IY37 1157 aaKnown RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 CTCFLQ8NI51 663 aaPredicted RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 EMID1Q96A84 441 aaPredicted RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 MAP3K14Q99558 947 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 SPZ1Q9BXG8 430 aa18.81■□□□□ 0.6
SCLT1-204ENST00000503215 YBX2Q9Y2T7 364 aaKnown RBP18.81■□□□□ 0.6
SCLT1-204ENST00000503215 PRUNE2Q8WUY3 3088 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 MYO9BQ13459 2157 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 SCN5AQ14524 2016 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 CASTP20810 708 aaKnown RBP18.8■□□□□ 0.6
SCLT1-204ENST00000503215 RABGGTBP53611 331 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 PTPN11Q06124 597 aaPredicted RBP18.8■□□□□ 0.6
SCLT1-204ENST00000503215 LAMC2Q13753 1193 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 PTGISQ16647 500 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 DGKDQ16760 1214 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 HSDL1Q3SXM5 330 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 CELF3Q5SZQ8 465 aaKnown RBP18.8■□□□□ 0.6
SCLT1-204ENST00000503215 USP17L6PQ6QN14 398 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 RASEFQ8IZ41 740 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 SAMD3Q8N6K7 520 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 PPTC7Q8NI37 304 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 DHX38Q92620 1227 aaKnown RBP18.8■□□□□ 0.6
SCLT1-204ENST00000503215 RRP36Q96EU6 259 aaKnown RBP18.8■□□□□ 0.6
SCLT1-204ENST00000503215 TMEM87BQ96K49 555 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 TCEANC2Q96MN5 208 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 ALG1Q9BT22 464 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 HDAC6Q9UBN7 1215 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 TELO2Q9Y4R8 837 aa18.8■□□□□ 0.6
SCLT1-204ENST00000503215 UNC80Q8N2C7 3258 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 TMEM265A0A087WTH1 108 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 CCDC69A6NI79 296 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 DLL1O00548 723 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 GGPS1O95749 300 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 IQCF3P0C7M6 154 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 MYOGP15173 224 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 UBA1P22314 1058 aaKnown RBP18.79■□□□□ 0.6
SCLT1-204ENST00000503215 CCND2P30279 289 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 PSEN2P49810 448 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 HIC1Q14526 733 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 RPUSD2Q8IZ73 545 aaKnown RBP18.79■□□□□ 0.6
SCLT1-204ENST00000503215 CCDC82Q8N4S0 544 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 MAFAQ8NHW3 353 aaPredicted RBP18.79■□□□□ 0.6
SCLT1-204ENST00000503215 MTA3Q9BTC8 594 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 RTEL1Q9NZ71 1219 aa18.79■□□□□ 0.6
SCLT1-204ENST00000503215 MYH7BA7E2Y1 1941 aa18.78■□□□□ 0.6
SCLT1-204ENST00000503215 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
SCLT1-204ENST00000503215 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
SCLT1-204ENST00000503215 FOSL2P15408 326 aa18.78■□□□□ 0.6
SCLT1-204ENST00000503215 KIF5BP33176 963 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms