RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 CCDC12Q8WUD4 166 aaPredicted RBP8.38□□□□□ -1.07
USP46-203ENST00000502443 GLT8D2Q9H1C3 349 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 UPF3AQ9H1J1 476 aaKnown RBP8.38□□□□□ -1.07
USP46-203ENST00000502443 RTEL1Q9NZ71 1219 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 PCDHA6Q9UN73 950 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 Q9Y3F1 56 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 PCDHA8Q9Y5H6 950 aa8.38□□□□□ -1.07
USP46-203ENST00000502443 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 NKRFO15226 690 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP46-203ENST00000502443 EVI5O60447 810 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 DTNBO60941 627 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 ARIH2O95376 493 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 DEXIO95424 95 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 LARGE1O95461 756 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 CST5P28325 142 aaPredicted RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 GNA11P29992 359 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 ACLYP53396 1101 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 ATN1P54259 1190 aaPredicted RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 BEX3Q00994 111 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 RABEP1Q15276 862 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 LY6KQ17RY6 165 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 PCNX4Q63HM2 1172 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 CCSAPQ6IQ19 270 aaPredicted RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 TEX2Q8IWB9 1127 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 PCSK9Q8NBP7 692 aaKnown RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 KLHDC9Q8NEP7 349 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 CCDC148Q8NFR7 591 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 OR6J1Q8NGC5 347 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 COPS5Q92905 334 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 GTF3C6Q969F1 213 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 VTI1AQ96AJ9 217 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 TSEN34Q9BSV6 310 aaKnown RBP8.37□□□□□ -1.07
USP46-203ENST00000502443 BACH2Q9BYV9 841 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 ZMYND12Q9H0C1 365 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 EHMT1Q9H9B1 1298 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 C6orf50Q9HD87 102 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 VPS54Q9P1Q0 977 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 LIMCH1Q9UPQ0 1083 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 PHF24Q9UPV7 400 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 MRVI1Q9Y6F6 885 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
USP46-203ENST00000502443 DNAH12Q6ZR08 3092 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
USP46-203ENST00000502443 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 ESYT2A0FGR8 921 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 CTAGE5O15320 804 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 ZEB2O60315 1214 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 STAM2O75886 525 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 RGS20O76081 388 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 CTDNEP1O95476 244 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 FOSP01100 380 aaPredicted RBP8.36□□□□□ -1.07
USP46-203ENST00000502443 ASGR1P07306 291 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 CPT1AP50416 773 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 NLRP5P59047 1200 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 NKX3-2P78367 333 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 LRRC26Q2I0M4 334 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 BRDTQ58F21 947 aaPredicted RBP8.36□□□□□ -1.07
USP46-203ENST00000502443 JAKMIP3Q5VZ66 844 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 XRRA1Q6P2D8 792 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 CCDC62Q6P9F0 684 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 KCNV1Q6PIU1 500 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 SLC39A5Q6ZMH5 540 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 REXO1Q8N1G1 1221 aaKnown RBP8.36□□□□□ -1.07
USP46-203ENST00000502443 BICD2Q8TD16 824 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 PGBD1Q96JS3 809 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 TBC1D32Q96NH3 1257 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 AIFM3Q96NN9 605 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 STARD7Q9NQZ5 370 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 SH3GLB2Q9NR46 395 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 TMEM260Q9NX78 707 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 DDX41Q9UJV9 622 aaKnown RBP8.36□□□□□ -1.07
USP46-203ENST00000502443 NR2E3Q9Y5X4 410 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 ALPK3Q96L96 1907 aa8.36□□□□□ -1.07
USP46-203ENST00000502443 ST18O60284 1047 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 SORBS3O60504 671 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 GH1P01241 217 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 TGFB3P10600 412 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 XBP1P17861 261 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 CLK2P49760 499 aaKnown RBP8.35□□□□□ -1.07
USP46-203ENST00000502443 AP3B2Q13367 1082 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 CXCL17Q6UXB2 119 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 NLRX1Q86UT6 975 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 DHX37Q8IY37 1157 aaKnown RBP8.35□□□□□ -1.07
USP46-203ENST00000502443 AFG1LQ8WV93 481 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 ZSCAN31Q96LW9 406 aaPredicted RBP8.35□□□□□ -1.07
USP46-203ENST00000502443 INPP4AQ96PE3 977 aaPredicted RBP8.35□□□□□ -1.07
USP46-203ENST00000502443 ANO3Q9BYT9 981 aa8.35□□□□□ -1.07
USP46-203ENST00000502443 ORC3Q9UBD5 711 aaPredicted RBP8.35□□□□□ -1.07
USP46-203ENST00000502443 STK36Q9NRP7 1315 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 A6NJR5 290 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 H0YGN5 161 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 ADAMTS3O15072 1205 aa8.34□□□□□ -1.07
USP46-203ENST00000502443 FIBPO43427 364 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms