RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 GOLGB1Q14789 3259 aaKnown RBP10.98□□□□□ -0.65
CLIP1-204ENST00000501271 MYO3BQ8WXR4 1341 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ZNF263O14978 683 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 SRGAP2O75044 1071 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ATP2B2Q01814 1243 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 NFIAQ12857 509 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 CCDC96Q2M329 555 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 VWA3BQ502W6 1294 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 MEX3CQ5U5Q3 659 aaKnown RBP10.97□□□□□ -0.65
CLIP1-204ENST00000501271 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 TMC4Q7Z404 712 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 CCDC170Q8IYT3 715 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 CUL5Q93034 780 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 NDST4Q9H3R1 872 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 SUGCTQ9HAC7 445 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 DDX25Q9UHL0 483 aaKnown RBP10.97□□□□□ -0.65
CLIP1-204ENST00000501271 DUSP10Q9Y6W6 482 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 H3BQF6 201 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 MPHOSPH10O00566 681 aaKnown RBP10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ZBTB5O15062 677 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 KRT86O43790 486 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ERCC3P19447 782 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 TUBB4BP68371 445 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 FAM193AP78312 1265 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 LRRC41Q15345 812 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 SLC27A3Q5K4L6 730 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 ZC3H12CQ9C0D7 883 aaKnown RBP10.97□□□□□ -0.65
CLIP1-204ENST00000501271 DNAJC18Q9H819 358 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 FAM207AQ9NSI2 230 aaPredicted RBP10.97□□□□□ -0.65
CLIP1-204ENST00000501271 MYH10P35580 1976 aa10.97□□□□□ -0.65
CLIP1-204ENST00000501271 BRWD3Q6RI45 1802 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 ERICH4A6NGS2 130 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 CYP2C19P33261 490 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 CDK17Q00537 523 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 MAN2A1Q16706 1144 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-204ENST00000501271 PAPD7Q5XG87 772 aaKnown RBP10.96□□□□□ -0.65
CLIP1-204ENST00000501271 APOBEC3HQ6NTF7 200 aaKnown RBP10.96□□□□□ -0.65
CLIP1-204ENST00000501271 KRT26Q7Z3Y9 468 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 ZFPM1Q8IX07 1006 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 MTMR8Q96EF0 704 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 PURBQ96QR8 312 aaKnown RBP10.96□□□□□ -0.65
CLIP1-204ENST00000501271 UIMC1Q96RL1 719 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 MMS19Q96T76 1030 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 SAR1BQ9Y6B6 198 aa10.96□□□□□ -0.65
CLIP1-204ENST00000501271 IPO7O95373 1038 aaKnown RBP10.96□□□□□ -0.66
CLIP1-204ENST00000501271 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.66
CLIP1-204ENST00000501271 LRRC63Q05C16 580 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 GPATCH4Q5T3I0 446 aaKnown RBP10.96□□□□□ -0.66
CLIP1-204ENST00000501271 GPIHBP1Q8IV16 184 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 DNAJC19Q96DA6 116 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 ARHGAP20Q9P2F6 1191 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 L1RE1Q9UN81 338 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 PLAGL2Q9UPG8 496 aa10.96□□□□□ -0.66
CLIP1-204ENST00000501271 ABCB11O95342 1321 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 MACROD2A1Z1Q3 448 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 FAM196BA6NMK8 535 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 ERLIN1O75477 346 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 VAV2P52735 878 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 MRPL12P52815 198 aaKnown RBP10.95□□□□□ -0.66
CLIP1-204ENST00000501271 COASYQ13057 564 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 C2CD5Q86YS7 1000 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 CAPZA3Q96KX2 299 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 FGFBP2Q9BYJ0 223 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 PSTPIP2Q9H939 334 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 RNF216Q9NWF9 866 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-204ENST00000501271 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-204ENST00000501271 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-204ENST00000501271 PCDHAC2Q9Y5I4 1007 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 TRIM37O94972 964 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 HLA-DOAP06340 250 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 CACNB3P54284 484 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 HDXQ7Z353 690 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 SMCR8Q8TEV9 937 aaPredicted RBP10.95□□□□□ -0.66
CLIP1-204ENST00000501271 TEKT1Q969V4 418 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 ZBTB9Q96C00 473 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 MMRN2Q9H8L6 949 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 SCN9AQ15858 1988 aa10.95□□□□□ -0.66
CLIP1-204ENST00000501271 ZNF646O15015 1829 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-204ENST00000501271 LRRC53A6NM62 1247 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 GYS2P54840 703 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 PSMD2Q13200 908 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 ZCWPW2Q504Y3 356 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 HHIPL2Q6UWX4 724 aa10.94□□□□□ -0.66
CLIP1-204ENST00000501271 IQCDQ96DY2 449 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms