RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 GIMAP8Q8ND71 665 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-206ENST00000498614 FRMPD2Q68DX3 1309 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-206ENST00000498614 MACROD2A1Z1Q3 448 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 C6orf229H3BNL8 230 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 PSMA7O14818 248 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 GNA11P29992 359 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 CYLC1P35663 651 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-206ENST00000498614 DNM2P50570 870 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 PICALMQ13492 652 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 NEK8Q86SG6 692 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 TBC1D16Q8TBP0 767 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 TBCKQ8TEA7 893 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
COL6A1-206ENST00000498614 MAGEC2Q9UBF1 373 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-206ENST00000498614 IDEP14735 1019 aa18.21■□□□□ 0.51
COL6A1-206ENST00000498614 JADE2Q9NQC1 790 aa18.21■□□□□ 0.51
COL6A1-206ENST00000498614 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
COL6A1-206ENST00000498614 RIMBP2O15034 1052 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 MYL1P05976 194 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 DUSP9Q99956 384 aaKnown RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 TUBGCP2Q9BSJ2 902 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 EXOC1Q9NV70 894 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 SHOX2O60902 331 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 TRIM21P19474 475 aaKnown RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 KCNA3P22001 575 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 EIF6P56537 245 aaKnown RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 PDE4DQ08499 809 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 SP8Q8IXZ3 490 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 PPM1EQ8WY54 764 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 AK8Q96MA6 479 aa18.2■□□□□ 0.5
COL6A1-206ENST00000498614 PURBQ96QR8 312 aaKnown RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 ZNHIT6Q9NWK9 470 aaKnown RBP18.2■□□□□ 0.5
COL6A1-206ENST00000498614 GAKO14976 1311 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 SLX4Q8IY92 1834 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 F8W031 263 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 PTGER2P43116 358 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 GTF2IP78347 998 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 ASIC1P78348 528 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 DNAJC21Q5F1R6 531 aaKnown RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 CLEC10AQ8IUN9 316 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 REXO1Q8N1G1 1221 aaKnown RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 FAM76AQ8TAV0 307 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 SMCR8Q8TEV9 937 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 AENQ8WTP8 325 aaKnown RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 DAGLAQ9Y4D2 1042 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 GOLGA6BA6NDN3 693 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 C21orf2O43822 256 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 FCER1AP12319 257 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 SLF2Q8IX21 1173 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 CCDC170Q8IYT3 715 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 HDAC7Q8WUI4 952 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 COA7Q96BR5 231 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 FAM163AQ96GL9 167 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-206ENST00000498614 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 CUEDC2Q9H467 287 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
COL6A1-206ENST00000498614 GOLGA6CA6NDK9 693 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 ZNF263O14978 683 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
COL6A1-206ENST00000498614 GOLGA6DP0CG33 693 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 PDHBP11177 359 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 TXKP42681 527 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 ZBED6P86452 979 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 STK4Q13043 487 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 KRT26Q7Z3Y9 468 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 CSGALNACT2Q8N6G5 542 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 HPS3Q969F9 1004 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 MMTAG2Q9BU76 263 aaKnown RBP18.18■□□□□ 0.5
COL6A1-206ENST00000498614 GOLGA6AQ9NYA3 693 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 MRPS25P82663 173 aaKnown RBP18.18■□□□□ 0.5
COL6A1-206ENST00000498614 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 CREG2Q8IUH2 290 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 TBC1D22AQ8WUA7 517 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
COL6A1-206ENST00000498614 PCMTD1Q96MG8 357 aaPredicted RBP18.18■□□□□ 0.5
COL6A1-206ENST00000498614 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
COL6A1-206ENST00000498614 NKRFO15226 690 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 PLEKP08567 350 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 IRAK1P51617 712 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 ICE2Q659A1 982 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 SND1Q7KZF4 910 aaKnown RBP eCLIP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 DHTKD1Q96HY7 919 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-206ENST00000498614 NUP58Q9BVL2 599 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 EHD4Q9H223 541 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 MAGEF1Q9HAY2 307 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 SNX12Q9UMY4 172 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 AKR1B1P15121 316 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 VAV2P52735 878 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 KIF5AQ12840 1032 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 ANKRD40Q6AI12 368 aa18.17■□□□□ 0.5
COL6A1-206ENST00000498614 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms