RNA–Protein interactions for RNA: ENST00000498574.1

IGKV1-39-201, Transcript of immunoglobulin kappa variable 1-39 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene IGKV1-39, Length 398 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-39-201ENST00000498574 RTP3Q9BQQ7 232 aa9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 RTKNQ9BST9 563 aa9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 IFIH1Q9BYX4 1025 aaKnown RBP9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 SMOC2Q9H3U7 446 aa9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 SWAP70Q9UH65 585 aa9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.61□□□□□ -0.87
IGKV1-39-201ENST00000498574 RAD50Q92878 1312 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 GLP2RO95838 553 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 ZNF618Q5T7W0 954 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 ZC3H14Q6PJT7 736 aaKnown RBP9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 GPR161Q8N6U8 529 aaKnown RBP9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 CCDC17Q96LX7 622 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 ACAD9Q9H845 621 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 KANSL2Q9H9L4 492 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 SLC38A10Q9HBR0 1119 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 A1CFQ9NQ94 594 aaKnown RBP9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 TSHZ2Q9NRE2 1034 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 NR2E1Q9Y466 385 aa9.6□□□□□ -0.87
IGKV1-39-201ENST00000498574 EMSYQ7Z589 1322 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 TRIP12Q14669 1992 aaPredicted RBP9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 A6NJR5 290 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 UBTFL1P0CB47 393 aaPredicted RBP9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 ARP10275 920 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 OAZ1P54368 228 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 TTC39AQ5SRH9 613 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 SESTD1Q86VW0 696 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 DYNLL2Q96FJ2 89 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 PLAGL2Q9UPG8 496 aa9.59□□□□□ -0.87
IGKV1-39-201ENST00000498574 FOCADQ5VW36 1801 aa9.59□□□□□ -0.88
IGKV1-39-201ENST00000498574 GCN1Q92616 2671 aaKnown RBP9.59□□□□□ -0.88
IGKV1-39-201ENST00000498574 MYH1P12882 1939 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 CEP295Q9C0D2 2601 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 SCN10AQ9Y5Y9 1956 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 LINC00271P0C7V0 271 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 CYP2D6P10635 497 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 NPR3P17342 541 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 ZAP70P43403 619 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 LMNB2Q03252 620 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 PPM1JQ5JR12 505 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 RIN2Q8WYP3 895 aaPredicted RBP9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 SEPT8Q92599 483 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 CLP1Q92989 425 aaKnown RBP9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 PLVAPQ9BX97 442 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 TLE6Q9H808 572 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 NCDNQ9UBB6 729 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 ANGPTL2Q9UKU9 493 aa9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 ASH1LQ9NR48 2969 aaKnown RBP9.58□□□□□ -0.88
IGKV1-39-201ENST00000498574 PARP14Q460N5 1801 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 RSPH10B2B2RC85 870 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 F5H6K3 240 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 NKRFO15226 690 aaKnown RBP eCLIP9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 ZIC2O95409 532 aaPredicted RBP9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 ASGR2P07307 311 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 RSPH10BP0C881 870 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 DNAJB1P25685 340 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 KLRC3Q07444 240 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 PTK7Q13308 1070 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 TRIM71Q2Q1W2 868 aaKnown RBP9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 CCDC158Q5M9N0 1113 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 VARS2Q5ST30 1063 aaKnown RBP9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 CRIPAKQ8N1N5 446 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 C7orf31Q8N865 590 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 SUMF1Q8NBK3 374 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 NEK1Q96PY6 1258 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 RNF146Q9NTX7 359 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 NAV2Q8IVL1 2488 aa9.57□□□□□ -0.88
IGKV1-39-201ENST00000498574 MICAL3Q7RTP6 2002 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 PER2O15055 1255 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 NDUFB10O96000 172 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 RBM10P98175 930 aaKnown RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 ZNF200P98182 395 aaPredicted RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 PPP2R5BQ15173 497 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 LRRC47Q8N1G4 583 aaKnown RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 SPPL3Q8TCT6 385 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 ATP8B4Q8TF62 1192 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 WNT8BQ93098 351 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 TRERF1Q96PN7 1200 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 RIOK1Q9BRS2 568 aaKnown RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 CRNKL1Q9BZJ0 848 aaKnown RBP9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 S1PR5Q9H228 398 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 GTF2IRD1Q9UHL9 959 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 HDAC5Q9UQL6 1122 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 PTPRCP08575 1304 aa9.56□□□□□ -0.88
IGKV1-39-201ENST00000498574 C2CD4DB7Z1M9 353 aa9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 STK25O00506 426 aa9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 KINO60870 393 aaKnown RBP9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 ITGB1P05556 798 aa9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 PROS1P07225 676 aa9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 SP9P0CG40 484 aa9.55□□□□□ -0.88
IGKV1-39-201ENST00000498574 CDK8P49336 464 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms