RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PIEZO1Q92508 2521 aa13.73□□□□□ -0.21
CDK9-205ENST00000498339 GRXCR2A6NFK2 248 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 CASTP20810 708 aaKnown RBP13.72□□□□□ -0.21
CDK9-205ENST00000498339 EDNRBP24530 442 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 LY6KQ17RY6 165 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 TIGD5Q53EQ6 642 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 SESTD1Q86VW0 696 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 GTF2IRD1Q9UHL9 959 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 CTNNA3Q9UI47 895 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 PNMA2Q9UL42 364 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 FAM50BQ9Y247 325 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 INSL6Q9Y581 213 aa13.72□□□□□ -0.21
CDK9-205ENST00000498339 CXCL10P02778 98 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 AMHP03971 560 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 TOP1P11387 765 aaKnown RBP13.71□□□□□ -0.21
CDK9-205ENST00000498339 GPNMBQ14956 572 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 DGKDQ16760 1214 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 TCTN1Q2MV58 587 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 BTNL9Q6UXG8 535 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 DHX37Q8IY37 1157 aaKnown RBP13.71□□□□□ -0.21
CDK9-205ENST00000498339 MRPL38Q96DV4 380 aaKnown RBP13.71□□□□□ -0.21
CDK9-205ENST00000498339 FBXL18Q96ME1 805 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 CTAGE1Q96RT6 745 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 KATNAL1Q9BW62 490 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 HDAC6Q9UBN7 1215 aa13.71□□□□□ -0.21
CDK9-205ENST00000498339 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
CDK9-205ENST00000498339 PSEN2P49810 448 aa13.7□□□□□ -0.22
CDK9-205ENST00000498339 RBL2Q08999 1139 aa13.7□□□□□ -0.22
CDK9-205ENST00000498339 ZNF618Q5T7W0 954 aa13.7□□□□□ -0.22
CDK9-205ENST00000498339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDK9-205ENST00000498339 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
CDK9-205ENST00000498339 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 LGR5O75473 907 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 PDHBP11177 359 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 PTK7Q13308 1070 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 MFSD10Q14728 455 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 ZMYM1Q5SVZ6 1142 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 BANK1Q8NDB2 785 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 KAT2BQ92831 832 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 KCNH6Q9H252 994 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 CLDND1Q9NY35 253 aa13.69□□□□□ -0.22
CDK9-205ENST00000498339 EMSYQ7Z589 1322 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 ORC4O43929 436 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 UPP2O95045 317 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 ZP2Q05996 745 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 GPM6BQ13491 265 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 EPC2Q52LR7 807 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 TCEAL5Q5H9L2 206 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 CCDC62Q6P9F0 684 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 SAMD11Q96NU1 681 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 MRVI1Q9Y6F6 885 aa13.68□□□□□ -0.22
CDK9-205ENST00000498339 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 SORBS3O60504 671 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 THPOP40225 353 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
CDK9-205ENST00000498339 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 STXBP2Q15833 593 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 CLUL1Q15846 466 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 MIER1Q8N108 512 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 DBF4BQ8NFT6 615 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 NSUN6Q8TEA1 469 aaKnown RBP13.67□□□□□ -0.22
CDK9-205ENST00000498339 WNT8BQ93098 351 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 PABPC5Q96DU9 382 aaKnown RBP13.67□□□□□ -0.22
CDK9-205ENST00000498339 UPF3BQ9BZI7 483 aaKnown RBP13.67□□□□□ -0.22
CDK9-205ENST00000498339 NSUN3Q9H649 340 aaKnown RBP13.67□□□□□ -0.22
CDK9-205ENST00000498339 ANAPC4Q9UJX5 808 aa13.67□□□□□ -0.22
CDK9-205ENST00000498339 ZNF318Q5VUA4 2279 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 TRIOO75962 3097 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 FOXP2O15409 715 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 CSPG5O95196 566 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 F2P00734 622 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 GOLGA8HP0CJ92 632 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 EIF2AK2P19525 551 aaKnown RBP13.66□□□□□ -0.22
CDK9-205ENST00000498339 NOVP48745 357 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 HTRA4P83105 476 aaPredicted RBP13.66□□□□□ -0.22
CDK9-205ENST00000498339 MBTPS1Q14703 1052 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 VPS53Q5VIR6 699 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 ARHGEF16Q5VV41 709 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 HFE2Q6ZVN8 426 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 ADHFE1Q8IWW8 467 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 SNX27Q96L92 541 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 MFSD14AQ96MC6 490 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 TAAR1Q96RJ0 339 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 RMDN3Q96TC7 470 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 PRKAG3Q9UGI9 489 aa13.66□□□□□ -0.22
CDK9-205ENST00000498339 ABCB11O95342 1321 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 KAT6AQ92794 2004 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 RSPH10B2B2RC85 870 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 H3BNC9 293 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 DHX16O60231 1041 aaKnown RBP13.65□□□□□ -0.22
CDK9-205ENST00000498339 RSPH10BP0C881 870 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 CTNNB1P35222 781 aa13.65□□□□□ -0.22
CDK9-205ENST00000498339 LAMC2Q13753 1193 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms