RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SYDE2Q5VT97 1194 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 CCDC62Q6P9F0 684 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 DCAF4Q8WV16 495 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 CRBNQ96SW2 442 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 PHOX2BQ99453 314 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 GTF2IRD1Q9UHL9 959 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 INSL6Q9Y581 213 aa19.46■□□□□ 0.71
VIM-208ENST00000497849 TECTAO75443 2155 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 TSPY2A6NKD2 308 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 HTRA4P83105 476 aaPredicted RBP19.45■□□□□ 0.7
VIM-208ENST00000497849 COL19A1Q14993 1142 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 TRIM71Q2Q1W2 868 aaKnown RBP19.45■□□□□ 0.7
VIM-208ENST00000497849 TSHZ3Q63HK5 1081 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 DNERQ8NFT8 737 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 SP7Q8TDD2 431 aaPredicted RBP19.45■□□□□ 0.7
VIM-208ENST00000497849 WNT8BQ93098 351 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 PABPC5Q96DU9 382 aaKnown RBP19.45■□□□□ 0.7
VIM-208ENST00000497849 NAPBQ9H115 298 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 PRKAG3Q9UGI9 489 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 CTNNA3Q9UI47 895 aa19.45■□□□□ 0.7
VIM-208ENST00000497849 NLRC5Q86WI3 1866 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 ARHGAP1Q07960 439 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 EPC2Q52LR7 807 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 BANK1Q8NDB2 785 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 MPHOSPH6Q99547 160 aaKnown RBP19.44■□□□□ 0.7
VIM-208ENST00000497849 HDAC6Q9UBN7 1215 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 ATG2AQ2TAZ0 1938 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 KIAA1217Q5T5P2 1943 aa19.44■□□□□ 0.7
VIM-208ENST00000497849 IRS1P35568 1242 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 PTPROQ16827 1216 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 TIGD5Q53EQ6 642 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 TCEAL5Q5H9L2 206 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 ZNF618Q5T7W0 954 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 ADHFE1Q8IWW8 467 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 DDX19BQ9UMR2 479 aa19.43■□□□□ 0.7
VIM-208ENST00000497849 FRMPD2Q68DX3 1309 aaPredicted RBP19.43■□□□□ 0.7
VIM-208ENST00000497849 H3BNC9 293 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 FOXP2O15409 715 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 LGR5O75473 907 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 PTK7Q13308 1070 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 LY6KQ17RY6 165 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 GPCPD1Q9NPB8 672 aa19.42■□□□□ 0.7
VIM-208ENST00000497849 GH1P01241 217 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 CASTP20810 708 aaKnown RBP19.41■□□□□ 0.7
VIM-208ENST00000497849 LTBRP36941 435 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 EP400NLQ6ZTU2 488 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 CHST3Q7LGC8 479 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 MYOCDQ8IZQ8 938 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 C7orf31Q8N865 590 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 DBF4BQ8NFT6 615 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 MFSD14AQ96MC6 490 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 ALG1Q9BT22 464 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 FAM50BQ9Y247 325 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 CFAP54Q96N23 3096 aa19.41■□□□□ 0.7
VIM-208ENST00000497849 RANBP6O60518 1105 aaKnown RBP19.4■□□□□ 0.7
VIM-208ENST00000497849 AMHP03971 560 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 PSEN2P49810 448 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 ZNF200P98182 395 aaPredicted RBP19.4■□□□□ 0.7
VIM-208ENST00000497849 GPM6BQ13491 265 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 HIC1Q14526 733 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 SEPT14Q6ZU15 432 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 PRSS33Q8NF86 280 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 SAMD11Q96NU1 681 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 NSUN3Q9H649 340 aaKnown RBP19.4■□□□□ 0.7
VIM-208ENST00000497849 MUTYHQ9UIF7 546 aa19.4■□□□□ 0.7
VIM-208ENST00000497849 MYH7BA7E2Y1 1941 aa19.39■□□□□ 0.7
VIM-208ENST00000497849 B4DLN1 442 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 HAS3O00219 553 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 MS4A1P11836 297 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 MRPL12P52815 198 aaKnown RBP19.39■□□□□ 0.69
VIM-208ENST00000497849 DGKDQ16760 1214 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 TMEM47Q9BQJ4 181 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 UPF3BQ9BZI7 483 aaKnown RBP19.39■□□□□ 0.69
VIM-208ENST00000497849 CLDND1Q9NY35 253 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 WDR19Q8NEZ3 1342 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 COL4A6Q14031 1691 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 RALGAPA2Q2PPJ7 1873 aa19.39■□□□□ 0.69
VIM-208ENST00000497849 F2P00734 622 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 MFSD10Q14728 455 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 KIAA0753Q2KHM9 967 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 HERC4Q5GLZ8 1057 aaPredicted RBP19.38■□□□□ 0.69
VIM-208ENST00000497849 TMEM192Q8IY95 271 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 TBC1D5Q92609 795 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 PNMA2Q9UL42 364 aa19.38■□□□□ 0.69
VIM-208ENST00000497849 EMSYQ7Z589 1322 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 ZNF286BP0CG31 522 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 PDHBP11177 359 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 TOP1P11387 765 aaKnown RBP19.37■□□□□ 0.69
VIM-208ENST00000497849 DLX2Q07687 328 aaPredicted RBP19.37■□□□□ 0.69
VIM-208ENST00000497849 SMAD2Q15796 467 aaKnown RBP19.37■□□□□ 0.69
VIM-208ENST00000497849 CTC1Q2NKJ3 1217 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 PLEKHG4Q58EX7 1191 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 ZMYM1Q5SVZ6 1142 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 IER5LQ5T953 404 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 RPAINQ86UA6 219 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 FBXO11Q86XK2 927 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 RGS22Q8NE09 1264 aa19.37■□□□□ 0.69
VIM-208ENST00000497849 TAAR1Q96RJ0 339 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms