RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 STXBP3O00186 592 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 KIAA0355O15063 1070 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 SEPT4O43236 478 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 IGHA2P01877 340 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 CLTBP09497 229 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 RAG1P15918 1043 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 ADCYAP1R1P41586 468 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 FAM160A1Q05DH4 1040 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 RBM43Q6ZSC3 357 aaKnown RBP22.52■■□□□ 1.2
ACTN4-208ENST00000497637 TRPV1Q8NER1 839 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 FUCA2Q9BTY2 467 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 BARHL2Q9NY43 387 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 NOL7Q9UMY1 257 aaKnown RBP22.52■■□□□ 1.2
ACTN4-208ENST00000497637 CEP131Q9UPN4 1083 aa22.52■■□□□ 1.2
ACTN4-208ENST00000497637 CTAGE5O15320 804 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 CUTAO60888 179 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 EEF2P13639 858 aaKnown RBP22.51■■□□□ 1.19
ACTN4-208ENST00000497637 EPHB4P54760 987 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 SNW1Q13573 536 aaKnown RBP22.51■■□□□ 1.19
ACTN4-208ENST00000497637 SEPT2Q15019 361 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 GPATCH4Q5T3I0 446 aaKnown RBP22.51■■□□□ 1.19
ACTN4-208ENST00000497637 OLFML2BQ68BL8 750 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 WWC2Q6AWC2 1192 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 POTEEQ6S8J3 1075 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 RASGRP2Q7LDG7 609 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 SIAH1Q8IUQ4 282 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 BLIDQ8IZY5 108 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 SYNPO2Q9UMS6 1093 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 PCDHA4Q9UN74 947 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 RLFQ13129 1914 aa22.51■■□□□ 1.19
ACTN4-208ENST00000497637 FAM237AA0A1B0GTK4 181 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L15C9J2P7 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L13C9JLJ4 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L11C9JVI0 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L18D6R9N7 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L22D6RA61 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L17D6RBQ6 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L19D6RCP7 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L20D6RJB6 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 hCG_1984214I3L0E3 225 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 BMP15O95972 392 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 MYCNP04198 464 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-208ENST00000497637 MARCKSP29966 332 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-208ENST00000497637 TRAPPC10P48553 1259 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 USP17L24Q0WX57 530 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 ZNF713Q8N859 430 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-208ENST00000497637 CCDC12Q8WUD4 166 aaPredicted RBP22.5■■□□□ 1.19
ACTN4-208ENST00000497637 DCAF4Q8WV16 495 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 GPKOWQ92917 476 aaPredicted RBP eCLIP22.5■■□□□ 1.19
ACTN4-208ENST00000497637 TNMDQ9H2S6 317 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 EMILIN3Q9NT22 766 aa22.5■■□□□ 1.19
ACTN4-208ENST00000497637 ICA1Q05084 483 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 EARS2Q5JPH6 523 aaKnown RBP22.49■■□□□ 1.19
ACTN4-208ENST00000497637 TYW1BQ6NUM6 668 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 CCDC174Q6PII3 467 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 HEATR3Q7Z4Q2 680 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 DPP9Q86TI2 863 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 FMR1NBQ8N0W7 255 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-208ENST00000497637 NPLOC4Q8TAT6 608 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 UBA5Q9GZZ9 404 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 GPCPD1Q9NPB8 672 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 SEC63Q9UGP8 760 aaKnown RBP22.49■■□□□ 1.19
ACTN4-208ENST00000497637 PCDHB6Q9Y5E3 794 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 FRMPD2Q68DX3 1309 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-208ENST00000497637 MYO9BQ13459 2157 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 MYH8P13535 1937 aa22.49■■□□□ 1.19
ACTN4-208ENST00000497637 M0R2N6 131 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 STRNO43815 780 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 CNMDO75829 334 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 ITGB8P26012 769 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 LRRC41Q15345 812 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 AAK1Q2M2I8 961 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 KRI1Q8N9T8 703 aaKnown RBP22.48■■□□□ 1.19
ACTN4-208ENST00000497637 FERMT2Q96AC1 680 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 PIGSQ96S52 555 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 CPVLQ9H3G5 476 aa22.48■■□□□ 1.19
ACTN4-208ENST00000497637 ESYT2A0FGR8 921 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 FAM205CA6NFA0 338 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 KINO60870 393 aaKnown RBP22.47■■□□□ 1.19
ACTN4-208ENST00000497637 GDF11O95390 407 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 GH2P01242 217 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 JAG1P78504 1218 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 SHROOM1Q2M3G4 852 aaPredicted RBP22.47■■□□□ 1.19
ACTN4-208ENST00000497637 SLFN13Q68D06 897 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 LBX2Q6XYB7 198 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 ZNF579Q8NAF0 562 aaKnown RBP22.47■■□□□ 1.19
ACTN4-208ENST00000497637 GMCL1P1Q8NEA9 526 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 MTMR8Q96EF0 704 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 C12orf42Q96LP6 360 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 ZMYND12Q9H0C1 365 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 PRDM12Q9H4Q4 367 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 VAT1LQ9HCJ6 419 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 TMEM39AQ9NV64 488 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 SLC5A4Q9NY91 659 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 CXXC1Q9P0U4 656 aaPredicted RBP22.47■■□□□ 1.19
ACTN4-208ENST00000497637 PHF24Q9UPV7 400 aa22.47■■□□□ 1.19
ACTN4-208ENST00000497637 A0A1B0GVL5 298 aa22.46■■□□□ 1.19
ACTN4-208ENST00000497637 NDUFA8P51970 172 aa22.46■■□□□ 1.19
ACTN4-208ENST00000497637 CAMK4Q16566 473 aa22.46■■□□□ 1.19
ACTN4-208ENST00000497637 CCDC96Q2M329 555 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms