RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
TOM1-217ENST00000497448 KCTD1Q719H9 257 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 FBXO11Q86XK2 927 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 CLASRPQ8N2M8 674 aaKnown RBP12.4□□□□□ -0.42
TOM1-217ENST00000497448 FBXL6Q8N531 539 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 SCFD2Q8WU76 684 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 KAT2BQ92831 832 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 WNT8BQ93098 351 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 GTF2IRD1Q9UHL9 959 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 PRR12Q9ULL5 1215 aa12.4□□□□□ -0.42
TOM1-217ENST00000497448 ZFHX2Q9C0A1 2572 aaPredicted RBP12.4□□□□□ -0.42
TOM1-217ENST00000497448 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 PTPDC1A2A3K4 754 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 STXBP3O00186 592 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 LGR5O75473 907 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 AMHP03971 560 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 ICAM1P05362 532 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 MMP3P08254 477 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 IFIT2P09913 472 aaKnown RBP12.39□□□□□ -0.43
TOM1-217ENST00000497448 MCCP23508 829 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 EDNRBP24530 442 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 HYAL1Q12794 435 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 TRIM71Q2Q1W2 868 aaKnown RBP12.39□□□□□ -0.43
TOM1-217ENST00000497448 ZKSCAN2Q63HK3 967 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 TMEM192Q8IY95 271 aa12.39□□□□□ -0.43
TOM1-217ENST00000497448 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
TOM1-217ENST00000497448 STRBPQ96SI9 672 aaKnown RBP12.39□□□□□ -0.43
TOM1-217ENST00000497448 TXNP10599 105 aaKnown RBP12.38□□□□□ -0.43
TOM1-217ENST00000497448 ZXDAP98168 799 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 PDE4DQ08499 809 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 ZNF618Q5T7W0 954 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 GIMAP6Q6P9H5 292 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 ITPRIPQ8IWB1 547 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 NEDD1Q8NHV4 660 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 ATOH1Q92858 354 aaPredicted RBP12.38□□□□□ -0.43
TOM1-217ENST00000497448 YME1L1Q96TA2 773 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 HAUS7Q99871 368 aa12.38□□□□□ -0.43
TOM1-217ENST00000497448 RANBP17Q9H2T7 1088 aaKnown RBP12.38□□□□□ -0.43
TOM1-217ENST00000497448 NCK2O43639 380 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 TSPY3P0CV98 308 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 TSPY8P0CW00 308 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 ATP5JP18859 108 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 CALML3P27482 149 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 PDE4BQ07343 736 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 PTK7Q13308 1070 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 ASCL5Q7RTU5 278 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 ERMP1Q7Z2K6 904 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 DBF4BQ8NFT6 615 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 KIF1BPQ96EK5 621 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 BCL11AQ9H165 835 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 ZNF287Q9HBT7 754 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 HDAC6Q9UBN7 1215 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 CD207Q9UJ71 328 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 KIAA1671Q9BY89 1806 aa12.37□□□□□ -0.43
TOM1-217ENST00000497448 LINC01565O15544 149 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 RLBP1P12271 317 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 CTNNB1P35222 781 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.43
TOM1-217ENST00000497448 TDO2P48775 406 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 RCSD1Q6JBY9 416 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 ZSCAN25Q6NSZ9 544 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 ASIC4Q96FT7 647 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 IRF2BPLQ9H1B7 796 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
TOM1-217ENST00000497448 PRR23AA6NEV1 266 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 LOC730098B7Z3J9 87 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 PROB1E7EW31 1015 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 H0Y858 1186 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 PSEN2P49810 448 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 ZNF200P98182 395 aaPredicted RBP12.35□□□□□ -0.43
TOM1-217ENST00000497448 ARHGAP1Q07960 439 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 SIGLEC14Q08ET2 396 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 PLEKHG4Q58EX7 1191 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 CCDC62Q6P9F0 684 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
TOM1-217ENST00000497448 C7orf31Q8N865 590 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 CLEC4DQ8WXI8 215 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 TOP1MTQ969P6 601 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 MPHOSPH6Q99547 160 aaKnown RBP12.35□□□□□ -0.43
TOM1-217ENST00000497448 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
TOM1-217ENST00000497448 C5orf67F2Z3F1 127 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 GRM6O15303 877 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 UPP2O95045 317 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 CSPG5O95196 566 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 F2P00734 622 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 GH1P01241 217 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 LINC00271P0C7V0 271 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 ZNF286BP0CG31 522 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 AVPR2P30518 371 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 SLC16A2P36021 539 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 RPS6P62753 249 aaKnown RBP12.34□□□□□ -0.43
TOM1-217ENST00000497448 TFAP4Q01664 338 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 HIC1Q14526 733 aa12.34□□□□□ -0.43
TOM1-217ENST00000497448 CBX2Q14781 532 aaPredicted RBP12.34□□□□□ -0.43
TOM1-217ENST00000497448 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms