RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 RICTORQ6R327 1708 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 LOC102724428A0A0B4J2F2 783 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 WDR64B1ANS9 1081 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 EYA2O00167 538 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CAPN5O15484 640 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 FIBPO43427 364 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 TGM5O43548 720 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 AP1G1O43747 822 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ORC4O43929 436 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 EIF4EBP3O60516 100 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 CNOT4O95628 575 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 IL33O95760 270 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CFBP00751 764 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SCG5P05408 212 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 HSD3B1P14060 373 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 RHOQP17081 205 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 PTPRAP18433 802 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 NTF4P34130 210 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CHKAP35790 457 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ZEB1P37275 1124 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 GPR3P46089 330 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FXR1P51114 621 aaKnown RBP eCLIP2.31□□□□□ -2.043e-9■■■■□ 20.2
UBR4-217ENST00000497018 AFF1P51825 1210 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 SIK1P57059 783 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 IL2P60568 153 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ZBED6P86452 979 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FAPQ12884 760 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 AP3B2Q13367 1082 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 TRIM14Q14142 442 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SCARF1Q14162 830 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 LBRQ14739 615 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 SF1Q15637 639 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 PCSK7Q16549 785 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ANKRD39Q53RE8 183 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 WDR45BQ5MNZ6 344 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 IFIT1BQ5T764 474 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 ZKSCAN2Q63HK3 967 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 TSHZ3Q63HK5 1081 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 DCAF15Q66K64 600 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 MAP1SQ66K74 1059 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 DENND5AQ6IQ26 1287 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FAM180BQ6P0A1 224 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CYP26C1Q6V0L0 522 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 UBE2R2Q712K3 238 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 BRINP3Q76B58 766 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ANKRD23Q86SG2 305 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 LINC00528Q8N1L1 170 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ARHGEF39Q8N4T4 335 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FAM26EQ8N5C1 309 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CHST14Q8NCH0 376 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 KREMEN2Q8NCW0 462 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 LRRN4CLQ8ND94 238 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FAM156AQ8NDB6 213 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ZSCAN18Q8TBC5 510 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 DDX54Q8TDD1 881 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 CHTF18Q8WVB6 975 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 DIO2Q92813 273 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SLC5A5Q92911 643 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 HPS3Q969F9 1004 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 RNF166Q96A37 237 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 RCC1LQ96I51 464 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 WNK4Q96J92 1243 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CDK5RAP3Q96JB5 506 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 MAGEB10Q96LZ2 347 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 FGD4Q96M96 766 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ORAI2Q96SN7 254 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SLC30A3Q99726 388 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 ACO2Q99798 780 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 EIF2AK1Q9BQI3 630 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 CENPOQ9BU64 300 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 GTPBP4Q9BZE4 634 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.31□□□□□ -2.044e-18■■■□□ 18
UBR4-217ENST00000497018 RNF38Q9H0F5 515 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 TMEM60Q9H2L4 133 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 BHMT2Q9H2M3 363 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 RUBCNLQ9H714 662 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 DMRT3Q9NQL9 472 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 CCM2LQ9NUG4 571 aaPredicted RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 BLOC1S4Q9NUP1 217 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 NDFIP2Q9NV92 336 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 FAM86C1Q9NVL1 165 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 THG1LQ9NWX6 298 aaKnown RBP2.31□□□□□ -2.04
UBR4-217ENST00000497018 GPRC5BQ9NZH0 403 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 MARK1Q9P0L2 795 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SAMD15Q9P1V8 674 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 KLHL3Q9UH77 587 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 PCDHA4Q9UN74 947 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 POLHQ9Y253 713 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 AFF2P51816 1311 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 PTPRGP23470 1445 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
UBR4-217ENST00000497018 A0A0G2JS52 829 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 hCG_1642624A0A1W2PR95 340 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 BICDL2A1A5D9 508 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 FAM155AB1AL88 458 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 FAM227AF5H4B4 570 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 H3BML4 177 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 J3QW42 95 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 WNT9AO14904 365 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms