RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ENPP1P22413 925 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SMARCA1P28370 1054 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 GJA8P48165 433 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TRAPPC10P48553 1259 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RBM6P78332 1123 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TNK2Q07912 1038 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 BIRC3Q13489 604 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 LRRC14Q15048 493 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TAF11Q15544 211 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 AOC3Q16853 763 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 PREPLQ4J6C6 727 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC158Q5M9N0 1113 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ACBD5Q5T8D3 534 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM214BQ7L5A3 538 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ZFPM2Q8WW38 1151 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 ARMC5Q96C12 935 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TMEM87BQ96K49 555 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 RNPC3Q96LT9 517 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 HSPA12BQ96MM6 686 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 FEZ1Q99689 392 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 BAG1Q99933 345 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TACO1Q9BSH4 297 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 TSPY26PQ9H489 355 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 UPF2Q9HAU5 1272 aaKnown RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 PAK6Q9NQU5 681 aaPredicted RBP3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 SAMM50Q9Y512 469 aa3.57□□□□□ -1.84
SNRNP48-202ENST00000496946 BAZ1BQ9UIG0 1483 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 NACADO15069 1562 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM25EA8MYX2 175 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 TBX3O15119 743 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC26A4O43511 780 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 COBLO75128 1261 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CEACAM5P06731 702 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ACRP10323 421 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 HARSP12081 509 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MYCLP1P12525 358 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 NSUN2Q08J23 767 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SIM2Q14190 667 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SLMAPQ14BN4 828 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PPP2R5BQ15173 497 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SEPT7Q16181 437 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 HHATQ5VTY9 493 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 LMBRD2Q68DH5 695 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 FAAH2Q6GMR7 532 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 OVOS1Q6IE37 1185 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PDXDC1Q6P996 788 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ZPBP2Q6X784 338 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC65Q8IXS2 484 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ARL6IP6Q8N6S5 226 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC43A3Q8NBI5 491 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 TBC1D31Q96DN5 1066 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 DHRS1Q96LJ7 313 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 GSDMAQ96QA5 445 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SH3GL3Q99963 347 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CRACR2AQ9BSW2 395 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 YIPF2Q9BWQ6 316 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MAK16Q9BXY0 300 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PRDM5Q9NQX1 630 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CHMP5Q9NZZ3 219 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ZMAT5Q9UDW3 170 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 EVLQ9UI08 416 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PCOLCE2Q9UKZ9 415 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 BARX2Q9UMQ3 279 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 JRKLQ9Y4A0 524 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SASH1O94885 1247 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 RPN1P04843 607 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNF24P17028 368 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MAP2K2P36507 400 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ZBED6P86452 979 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 LMNB2Q03252 620 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ARID5AQ03989 594 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PKN1Q16512 942 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MCATQ8IVS2 390 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 FAM169BQ8N8A8 192 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ARL10Q8N8L6 244 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 DRAXINQ8NBI3 349 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ANKRD20A12PQ8NF67 263 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC26Q8TAB7 109 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 PPP1R13LQ8WUF5 828 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 BCL7CQ8WUZ0 217 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 NACC2Q96BF6 587 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 RSRC1Q96IZ7 334 aaKnown RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 APBA2Q99767 749 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC39A3Q9BRY0 314 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 TGIF2Q9GZN2 237 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 KMT5AQ9NQR1 393 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 TOMM22Q9NS69 142 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 CLIC5Q9NZA1 410 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 SEL1LQ9UBV2 794 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 ATP8A1Q9Y2Q0 1164 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 TMEM98Q9Y2Y6 226 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 RABGAP1Q9Y3P9 1069 aa3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MORC2Q9Y6X9 1032 aaPredicted RBP3.56□□□□□ -1.84
SNRNP48-202ENST00000496946 MTRF1O75570 445 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 UBOX5O94941 541 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 BAG4O95429 457 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TRHRP34981 398 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TSPAN7P41732 249 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 RPS26P62854 115 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms