RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ESYT3A0FGR9 886 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 ARNTLO00327 626 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 SH3BP5O60239 455 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 PPM1BO75688 479 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 EFEMP2O95967 443 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 IFNGR1P15260 489 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 GYS2P54840 703 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 EVA1CP58658 441 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 IKZF1Q13422 519 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 PPP2R5DQ14738 602 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 MAP9Q49MG5 647 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 FOXB2Q5VYV0 432 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 ZPBP2Q6X784 338 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 RNF111Q6ZNA4 994 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 C11orf96Q7Z7L8 435 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 FERMT3Q86UX7 667 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 CREG2Q8IUH2 290 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 BTN2A2Q8WVV5 523 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 ZDHHC15Q96MV8 337 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 FCRL3Q96P31 734 aaPredicted RBP4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 MAF1Q9H063 256 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 CARS2Q9HA77 564 aaKnown RBP4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 MBNL3Q9NUK0 354 aaKnown RBP4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 PCMTD2Q9NV79 361 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 PNMA2Q9UL42 364 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 TCFL5Q9UL49 500 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 AKT3Q9Y243 479 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 EID1Q9Y6B2 187 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 DISP2A7MBM2 1401 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 C9orf84Q5VXU9 1444 aa4.79□□□□□ -1.64
EXOSC3-208ENST00000496910 NUP188Q5SRE5 1749 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 CACNA1BQ00975 2339 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 NOTOA8MTQ0 251 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 AURKAO14965 403 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 VAMP4O75379 141 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SCG5P05408 212 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SYPP08247 313 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 NAT2P11245 290 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 MASP1P48740 699 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 PPP2R2AP63151 447 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 EGR3Q06889 387 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SF1Q15637 639 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 CLEC16AQ2KHT3 1053 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SV2CQ496J9 727 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 MTERF2Q49AM1 385 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 RALGPS1Q5JS13 557 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 NOL9Q5SY16 702 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 ANGEL2Q5VTE6 544 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 YOD1Q5VVQ6 348 aaPredicted RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 GTF2IRD2BQ6EKJ0 949 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 DENND5AQ6IQ26 1287 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 CBLL1Q75N03 491 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 ADAT2Q7Z6V5 191 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 GTF2IRD2Q86UP8 949 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 LRRN4CLQ8ND94 238 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 TMEM52Q8NDY8 209 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 FLCNQ8NFG4 579 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 LINC01599Q8WXQ3 324 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 COPS5Q92905 334 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 TSR2Q969E8 191 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SLC39A13Q96H72 371 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 DSCC1Q9BVC3 393 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SPATA9Q9BWV2 254 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 ASCC2Q9H1I8 757 aaPredicted RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 SLKQ9H2G2 1235 aaPredicted RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 NKX2-4Q9H2Z4 354 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 PRDM7Q9NQW5 492 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 GEMIN8Q9NWZ8 242 aaKnown RBP4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 PFDN2Q9UHV9 154 aa4.78□□□□□ -1.64
EXOSC3-208ENST00000496910 ATP10BO94823 1461 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 DNAJC25-GNG10A0A024R161 153 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 FGF10O15520 208 aaPredicted RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 KCNH1O95259 989 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 VIL1P09327 827 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 ZGLP1P0C6A0 271 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 FAM153BP0C7A2 387 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 GFRA1P56159 465 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 PCBP3P57721 371 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 ZP2Q05996 745 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 SQSTM1Q13501 440 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 UBE4AQ14139 1066 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 TESK1Q15569 626 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 RCSD1Q6JBY9 416 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 ABI1Q8IZP0 508 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 TMTC2Q8N394 836 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 PRPF38AQ8NAV1 312 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 KREMEN2Q8NCW0 462 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 APPBP2Q92624 585 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 OSBP2Q969R2 916 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 FAM126AQ9BYI3 521 aaPredicted RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 ERVK13-1Q9NX77 482 aa4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 GPR55Q9Y2T6 319 aaPredicted RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 SF3B6Q9Y3B4 125 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 TNS1Q9HBL0 1735 aaKnown RBP4.77□□□□□ -1.65
EXOSC3-208ENST00000496910 SPTBN5Q9NRC6 3674 aaKnown RBP4.76□□□□□ -1.65
EXOSC3-208ENST00000496910 HECW1Q76N89 1606 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms