RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 USP25Q9UHP3 1055 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 ANKRD31Q8N7Z5 1873 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 GAKO14976 1311 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 MYH2Q9UKX2 1941 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 A0A1B0GUL6 1792 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 UNCXA6NJT0 531 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 BIN1O00499 593 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 SPTLC2O15270 562 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 AP5Z1O43299 807 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 MSNP26038 577 aaKnown RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 AKAP17AQ02040 695 aaKnown RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 TMTC3Q6ZXV5 915 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 LUZP1Q86V48 1076 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 TTLL6Q8N841 843 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 CTCFLQ8NI51 663 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 CNKSR1Q969H4 720 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 SYAP1Q96A49 352 aaPredicted RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 DNAJC18Q9H819 358 aa6.97□□□□□ -1.29
SSBP1-213ENST00000496622 CHCHD3Q9NX63 227 aaKnown RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 ISY1Q9ULR0 285 aaKnown RBP6.97□□□□□ -1.29
SSBP1-213ENST00000496622 ELP1O95163 1332 aa6.96□□□□□ -1.29
SSBP1-213ENST00000496622 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.29
SSBP1-213ENST00000496622 CUL9Q8IWT3 2517 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 CCDC196A0A1B0GTZ2 297 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 IPO5O00410 1097 aaKnown RBP6.96□□□□□ -1.3
SSBP1-213ENST00000496622 DEXIO95424 95 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 EGFRP00533 1210 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 LMNB1P20700 586 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 CDC25AP30304 524 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 NPY5RQ15761 445 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 SASS6Q6UVJ0 657 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 TMC4Q7Z404 712 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 ZBTB33Q86T24 672 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 NOSTRINQ8IVI9 506 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 AMOTL1Q8IY63 956 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 LARGE2Q8N3Y3 721 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 OGFOD1Q8N543 542 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 PDILTQ8N807 584 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 RTEL1Q9NZ71 1219 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 SLX4Q8IY92 1834 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 KIF13BQ9NQT8 1826 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 RBM47A0AV96 593 aaKnown RBP6.96□□□□□ -1.3
SSBP1-213ENST00000496622 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 TCP10L2B9ZVM9 353 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 GDF11O95390 407 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 U2AF2P26368 475 aaKnown RBP eCLIP6.96□□□□□ -1.3
SSBP1-213ENST00000496622 VARSP26640 1264 aaKnown RBP6.96□□□□□ -1.3
SSBP1-213ENST00000496622 SLC16A2P36021 539 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 GSCP56915 257 aaPredicted RBP6.96□□□□□ -1.3
SSBP1-213ENST00000496622 JAG1P78504 1218 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 TRAF7Q6Q0C0 670 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 C16orf86Q6ZW13 317 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 CCDC91Q7Z6B0 441 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 UIMC1Q96RL1 719 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 MAP3K14Q99558 947 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 FUCA2Q9BTY2 467 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 CLIP2Q9UDT6 1046 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 MAD2L2Q9UI95 211 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 SERPINB13Q9UIV8 391 aa6.96□□□□□ -1.3
SSBP1-213ENST00000496622 PSMD14O00487 310 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 TAL1P17542 331 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 RAD51AP2Q09MP3 1159 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 IFT88Q13099 833 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 PTPAQ15257 358 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ZNF174Q15697 407 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 MAP3K11Q16584 847 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 STRIP1Q5VSL9 837 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 TTBK2Q6IQ55 1244 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 SHC4Q6S5L8 630 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 PIK3AP1Q6ZUJ8 805 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 HEATR3Q7Z4Q2 680 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ITPKCQ96DU7 683 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 SDF4Q9BRK5 362 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 OSBPL5Q9H0X9 879 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 KLHL42Q9P2K6 505 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 TPX2Q9ULW0 747 aaKnown RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 CNTNAP5Q8WYK1 1306 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 KLRF2D3W0D1 207 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 CCP110O43303 1012 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 SHMT1P34896 483 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 TYRO3Q06418 890 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 GABPAQ06546 454 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 CFAP100Q494V2 611 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ANO6Q4KMQ2 910 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ADALQ6DHV7 355 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 MIGA2Q7L4E1 593 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 VASH1Q7L8A9 365 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 BRAPQ7Z569 592 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 CCDC84Q86UT8 332 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 DGKHQ86XP1 1220 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ARL10Q8N8L6 244 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ENGASEQ8NFI3 743 aa6.95□□□□□ -1.3
SSBP1-213ENST00000496622 RNF26Q9BY78 433 aaPredicted RBP6.95□□□□□ -1.3
SSBP1-213ENST00000496622 ZFAND3Q9H8U3 227 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms