RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 RTEL1Q9NZ71 1219 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 NCLP19338 710 aaKnown RBP24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 CCND2P30279 289 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 ZNF76P36508 570 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 KRT85P78386 507 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 CLEC17AQ6ZS10 378 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 JMYQ8N9B5 988 aa24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 NAP1L4Q99733 375 aaKnown RBP24.77■■□□□ 1.56
ECHDC3-205ENST00000496136 B4DLN1 442 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 BAG4O95429 457 aaKnown RBP24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 GCFC2P16383 781 aaKnown RBP24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 CEP55Q53EZ4 464 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 ZNF467Q7Z7K2 595 aaPredicted RBP24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 MAML3Q96JK9 1138 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 MBOAT7Q96N66 472 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 CNPY2Q9Y2B0 182 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 MCM3APO60318 1980 aa24.76■■□□□ 1.55
ECHDC3-205ENST00000496136 LOC102724159A0A0B4J2E5 919 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 CYP2B6P20813 491 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 RGS2P41220 211 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 NASPP49321 788 aaPredicted RBP24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 PTPAQ15257 358 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 PWP2Q15269 919 aaKnown RBP24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 STXBP2Q15833 593 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 MORC4Q8TE76 937 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 ERO1AQ96HE7 468 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 DDX25Q9UHL0 483 aaKnown RBP24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 GABRQQ9UN88 632 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 IGLV3-22A0A075B6J6 115 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 ASB14A6NK59 587 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 MEIS1O00470 390 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 SLC37A4O43826 429 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 ITGB5P18084 799 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 PRR16Q569H4 304 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 LINC00301Q8NCQ3 95 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 MPHOSPH6Q99547 160 aaKnown RBP24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 MXRA8Q9BRK3 442 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 UBIAD1Q9Y5Z9 338 aa24.75■■□□□ 1.55
ECHDC3-205ENST00000496136 EIF3JO75822 258 aaKnown RBP24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 FLT3LGP49771 235 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 PDE4DQ08499 809 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 PTGDRQ13258 359 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 ORC2Q13416 577 aaPredicted RBP24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 SLC39A14Q15043 492 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 Q4G0T1 1027 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 MAMDC4Q6UXC1 1216 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 C4orf32Q8N8J7 132 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 LENG9Q96B70 501 aa24.74■■□□□ 1.55
ECHDC3-205ENST00000496136 RCOR1Q9UKL0 485 aa24.73■■□□□ 1.55
ECHDC3-205ENST00000496136 NEMFO60524 1076 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 STAM2O75886 525 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 RGS20O76081 388 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 XRCC5P13010 732 aaKnown RBP24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 PRKCZQ05513 592 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 ARMCX2Q7L311 632 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 POTEDQ86YR6 584 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 INPP4AQ96PE3 977 aaPredicted RBP24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 APBA2Q99767 749 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 WDR11Q9BZH6 1224 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 SCAND2PQ9GZW5 306 aaPredicted RBP24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 TMEM60Q9H2L4 133 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 GDPD2Q9HCC8 539 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 CEP131Q9UPN4 1083 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 MRVI1Q9Y6F6 885 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 YEATS4O95619 227 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 GNRH1P01148 92 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 HOXD10P28358 340 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 NIPA1Q7RTP0 329 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 PLA2G4DQ86XP0 818 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 TINF2Q9BSI4 451 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 JADE2Q9NQC1 790 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 FLRT1Q9NZU1 646 aa24.72■■□□□ 1.55
ECHDC3-205ENST00000496136 FIBPO43427 364 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 BMP15O95972 392 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 ATP2C1P98194 919 aaPredicted RBP24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 STK38Q15208 465 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 CCL14Q16627 93 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 MSL3Q8N5Y2 521 aaKnown RBP24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 LEO1Q8WVC0 666 aaPredicted RBP24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 SPATA32Q96LK8 384 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 SRRDQ9UH36 339 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 KIAA1217Q5T5P2 1943 aa24.71■■□□□ 1.55
ECHDC3-205ENST00000496136 ARP10275 920 aa24.7■■□□□ 1.55
ECHDC3-205ENST00000496136 ARHGEF6Q15052 776 aa24.7■■□□□ 1.55
ECHDC3-205ENST00000496136 EEPD1Q7L9B9 569 aa24.7■■□□□ 1.55
ECHDC3-205ENST00000496136 MTMR9Q96QG7 549 aa24.7■■□□□ 1.55
ECHDC3-205ENST00000496136 KCNH7Q9NS40 1196 aa24.7■■□□□ 1.55
ECHDC3-205ENST00000496136 SPTLC2O15270 562 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 SNAI1O95863 264 aaPredicted RBP24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 MTMR1Q13613 665 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 OLFML2BQ68BL8 750 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 HAS1Q92839 578 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 GBP4Q96PP9 640 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 KCNMB3Q9NPA1 279 aa24.7■■□□□ 1.54
ECHDC3-205ENST00000496136 SYNGAP1Q96PV0 1343 aa24.69■■□□□ 1.54
ECHDC3-205ENST00000496136 LAD1O00515 517 aa24.69■■□□□ 1.54
ECHDC3-205ENST00000496136 MSH4O15457 936 aa24.69■■□□□ 1.54
ECHDC3-205ENST00000496136 IGHA2P01877 340 aa24.69■■□□□ 1.54
ECHDC3-205ENST00000496136 MARCKSP29966 332 aaPredicted RBP24.69■■□□□ 1.54
ECHDC3-205ENST00000496136 SETQ01105 290 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms