RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ANKRD13AQ8IZ07 590 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 SNX29Q8TEQ0 813 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 RRAGCQ9HB90 399 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 HOMER2Q9NSB8 354 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 MSH4O15457 936 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 CLMNQ96JQ2 1002 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 FAM20AQ96MK3 541 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 ELP3Q9H9T3 547 aa18.42■□□□□ 0.54
HLA-A-208ENST00000496081 MAP3K20Q9NYL2 800 aaKnown RBP18.42■□□□□ 0.54
HLA-A-208ENST00000496081 MYL1P05976 194 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 OAZ1P54368 228 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 PPATQ06203 517 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 SPIRE1Q08AE8 756 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 SARM1Q6SZW1 724 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 SAMD3Q8N6K7 520 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 TRERF1Q96PN7 1200 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 TRIM5Q9C035 493 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 BLOC1S4Q9NUP1 217 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 DACH1Q9UI36 760 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 ZNF214Q9UL59 606 aaPredicted RBP18.41■□□□□ 0.54
HLA-A-208ENST00000496081 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
HLA-A-208ENST00000496081 RBBP6Q7Z6E9 1792 aaKnown RBP18.41■□□□□ 0.54
HLA-A-208ENST00000496081 RPN1P04843 607 aaKnown RBP18.4■□□□□ 0.54
HLA-A-208ENST00000496081 MYL5Q02045 173 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 TTLL12Q14166 644 aaPredicted RBP18.4■□□□□ 0.54
HLA-A-208ENST00000496081 TMEM119Q4V9L6 283 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 PLA2G4DQ86XP0 818 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 NMRK2Q9NPI5 230 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 HOXC10Q9NYD6 342 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 STK17AQ9UEE5 414 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 MYPNQ86TC9 1320 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 SPDYE16A6NNV3 312 aaPredicted RBP18.4■□□□□ 0.54
HLA-A-208ENST00000496081 IRF6O14896 467 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 YY1P25490 414 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 ZNF75DP51815 510 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 ECM1Q16610 540 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 HYIQ5T013 277 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 ERO1BQ86YB8 467 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 SYTL5Q8TDW5 730 aaPredicted RBP18.4■□□□□ 0.54
HLA-A-208ENST00000496081 OTUD5Q96G74 571 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 HSD3B7Q9H2F3 369 aa18.4■□□□□ 0.54
HLA-A-208ENST00000496081 SPDYE5A6NIY4 337 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 ATP2A1O14983 1001 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 KLRC4O43908 158 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 CD44P16070 742 aaKnown RBP18.39■□□□□ 0.53
HLA-A-208ENST00000496081 STAT3P40763 770 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 RPS6P62753 249 aaKnown RBP18.39■□□□□ 0.53
HLA-A-208ENST00000496081 FMR1Q06787 632 aaKnown RBP eCLIP18.39■□□□□ 0.53
HLA-A-208ENST00000496081 CEP55Q53EZ4 464 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 SNRNP48Q6IEG0 339 aaKnown RBP18.39■□□□□ 0.53
HLA-A-208ENST00000496081 TRIM9Q9C026 710 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 RMND1Q9NWS8 449 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 RABGAP1Q9Y3P9 1069 aa18.39■□□□□ 0.53
HLA-A-208ENST00000496081 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 CCT6AP40227 531 aaKnown RBP18.38■□□□□ 0.53
HLA-A-208ENST00000496081 CT47A1Q5JQC4 288 aaPredicted RBP18.38■□□□□ 0.53
HLA-A-208ENST00000496081 SLC30A10Q6XR72 485 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 KCNK18Q7Z418 384 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 SMYD4Q8IYR2 804 aaPredicted RBP18.38■□□□□ 0.53
HLA-A-208ENST00000496081 LARP4BQ92615 738 aaKnown RBP18.38■□□□□ 0.53
HLA-A-208ENST00000496081 RAD54LQ92698 747 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 ZFP91Q96JP5 570 aaPredicted RBP18.38■□□□□ 0.53
HLA-A-208ENST00000496081 MED15Q96RN5 788 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 C7orf25Q9BPX7 421 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 VAV3Q9UKW4 847 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 LOC285556D6RIA3 1793 aa18.38■□□□□ 0.53
HLA-A-208ENST00000496081 A0A0G2JLL6 359 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 PPP1R3GB7ZBB8 358 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 MEIS1O00470 390 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 ERCC5P28715 1186 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 TPM4P67936 248 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 AMPD3Q01432 767 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 MCM6Q14566 821 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 KCNB1Q14721 858 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 HS1BP3Q53T59 392 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 ZNF658Q5TYW1 1059 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 RNF207Q6ZRF8 634 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 SV2BQ7L1I2 683 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 PRRT2Q7Z6L0 340 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 ENOX1Q8TC92 643 aaKnown RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 TAAR1Q96RJ0 339 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 CLEC11AQ9Y240 323 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 KDM3AQ9Y4C1 1321 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 CXCL11O14625 94 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 SLC26A4O43511 780 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 DHX8Q14562 1220 aaKnown RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 KMT5BQ4FZB7 885 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 NSMFQ6X4W1 530 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 ARMC9Q7Z3E5 817 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
HLA-A-208ENST00000496081 IL31RAQ8NI17 732 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 MXRA8Q9BRK3 442 aa18.37■□□□□ 0.53
HLA-A-208ENST00000496081 TEX13BQ9BXU2 312 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms