RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 GTF2IRD1Q9UHL9 959 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 WDFY4Q6ZS81 3184 aa15.84■□□□□ 0.13
COL1A1-209ENST00000495677 FOXP2O15409 715 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 TOP1P11387 765 aaKnown RBP15.83■□□□□ 0.12
COL1A1-209ENST00000495677 HTRA4P83105 476 aaPredicted RBP15.83■□□□□ 0.12
COL1A1-209ENST00000495677 NHLH1Q02575 133 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 CTDSPL2Q05D32 466 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 PTK7Q13308 1070 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 MKRN4PQ13434 485 aaPredicted RBP15.83■□□□□ 0.12
COL1A1-209ENST00000495677 COL19A1Q14993 1142 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
COL1A1-209ENST00000495677 AFG1LQ8WV93 481 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 MRPL38Q96DV4 380 aaKnown RBP15.83■□□□□ 0.12
COL1A1-209ENST00000495677 TTC14Q96N46 770 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 SAMD11Q96NU1 681 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 INCENPQ9NQS7 918 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 PRKAG3Q9UGI9 489 aa15.83■□□□□ 0.12
COL1A1-209ENST00000495677 HAS3O00219 553 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 DCXO43602 365 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 RANBP6O60518 1105 aaKnown RBP15.82■□□□□ 0.12
COL1A1-209ENST00000495677 GH1P01241 217 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 PDHBP11177 359 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 SSTR3P32745 418 aaPredicted RBP15.82■□□□□ 0.12
COL1A1-209ENST00000495677 ARHGAP1Q07960 439 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 ALX1Q15699 326 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 CSPP1Q1MSJ5 1256 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 TCTN1Q2MV58 587 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 TRIM71Q2Q1W2 868 aaKnown RBP15.82■□□□□ 0.12
COL1A1-209ENST00000495677 TRAF7Q6Q0C0 670 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 EMID1Q96A84 441 aaPredicted RBP15.82■□□□□ 0.12
COL1A1-209ENST00000495677 TMEM47Q9BQJ4 181 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 KATNAL1Q9BW62 490 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 HDAC6Q9UBN7 1215 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 COL4A6Q14031 1691 aa15.82■□□□□ 0.12
COL1A1-209ENST00000495677 C19orf67A6NJJ6 358 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 SNHG28P0DPA3 235 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 DGKDQ16760 1214 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 PTPROQ16827 1216 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 FBXO22Q8NEZ5 403 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 IWS1Q96ST2 819 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 MTUS1Q9ULD2 1270 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 MTMR7Q9Y216 660 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 FAM50BQ9Y247 325 aa15.81■□□□□ 0.12
COL1A1-209ENST00000495677 EMSYQ7Z589 1322 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 LGR5O75473 907 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 ZNF543Q08ER8 600 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 LY6KQ17RY6 165 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 PI4K2BQ8TCG2 481 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 PABPC5Q96DU9 382 aaKnown RBP15.8■□□□□ 0.12
COL1A1-209ENST00000495677 FBXL18Q96ME1 805 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 C17orf80Q9BSJ5 609 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 GPCPD1Q9NPB8 672 aa15.8■□□□□ 0.12
COL1A1-209ENST00000495677 TRIOO75962 3097 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 FRMPD2Q68DX3 1309 aaPredicted RBP15.79■□□□□ 0.12
COL1A1-209ENST00000495677 H3BNC9 293 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 F2P00734 622 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 PSEN2P49810 448 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 TIGD5Q53EQ6 642 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 ZNF618Q5T7W0 954 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 C7orf31Q8N865 590 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 NSUN6Q8TEA1 469 aaKnown RBP15.79■□□□□ 0.12
COL1A1-209ENST00000495677 UIMC1Q96RL1 719 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 CRBNQ96SW2 442 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 DDX41Q9UJV9 622 aaKnown RBP15.79■□□□□ 0.12
COL1A1-209ENST00000495677 C5orf42Q9H799 3197 aa15.79■□□□□ 0.12
COL1A1-209ENST00000495677 TECTAO75443 2155 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 NCK2O43639 380 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 AMHP03971 560 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-209ENST00000495677 CHMP4BP1P59074 171 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 ZP2Q05996 745 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 LAMC2Q13753 1193 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 MBTPS1Q14703 1052 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 STXBP2Q15833 593 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 GPATCH4Q5T3I0 446 aaKnown RBP15.78■□□□□ 0.12
COL1A1-209ENST00000495677 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL1A1-209ENST00000495677 BANK1Q8NDB2 785 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
COL1A1-209ENST00000495677 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
COL1A1-209ENST00000495677 PPFIA4O75335 1185 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 PLEKHG4Q58EX7 1191 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 SEPT14Q6ZU15 432 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 ADHFE1Q8IWW8 467 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 DBF4BQ8NFT6 615 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 PPTC7Q8NI37 304 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 TOP1MTQ969P6 601 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 TAAR1Q96RJ0 339 aa15.77■□□□□ 0.12
COL1A1-209ENST00000495677 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
COL1A1-209ENST00000495677 PCP11498 1178 aaKnown RBP15.76■□□□□ 0.11
COL1A1-209ENST00000495677 MFSD10Q14728 455 aa15.76■□□□□ 0.11
COL1A1-209ENST00000495677 FAM117BQ6P1L5 589 aa15.76■□□□□ 0.11
COL1A1-209ENST00000495677 TICAM2Q86XR7 235 aa15.76■□□□□ 0.11
COL1A1-209ENST00000495677 SYTL5Q8TDW5 730 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-209ENST00000495677 TBC1D5Q92609 795 aa15.76■□□□□ 0.11
COL1A1-209ENST00000495677 WNT8BQ93098 351 aa15.76■□□□□ 0.11
COL1A1-209ENST00000495677 MFSD14AQ96MC6 490 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms