RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 GPHNQ9NQX3 736 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-219ENST00000495172 FANCMQ8IYD8 2048 aa10.8□□□□□ -0.68
GARNL3-219ENST00000495172 CYP2D7A0A087X1C5 515 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 C2CD4DB7Z1M9 353 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 BMPR1AP36894 532 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 ZAP70P43403 619 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 MTMR3Q13615 1198 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 DUSP28Q4G0W2 176 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 PPM1JQ5JR12 505 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 CAGE1Q8TC20 777 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 KIFC2Q96AC6 838 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 WDR11Q9BZH6 1224 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 SORCS3Q9UPU3 1222 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
GARNL3-219ENST00000495172 CNOT1A5YKK6 2376 aaKnown RBP10.79□□□□□ -0.68
GARNL3-219ENST00000495172 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-219ENST00000495172 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 MMP1P03956 469 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 NCLP19338 710 aaKnown RBP10.78□□□□□ -0.68
GARNL3-219ENST00000495172 SNAP25P60880 206 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 DMWDQ09019 674 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 TRIM71Q2Q1W2 868 aaKnown RBP10.78□□□□□ -0.68
GARNL3-219ENST00000495172 SUMF1Q8NBK3 374 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 TOP1MTQ969P6 601 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
GARNL3-219ENST00000495172 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 CDV3Q9UKY7 258 aaKnown RBP10.78□□□□□ -0.68
GARNL3-219ENST00000495172 Q9Y3F1 56 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
GARNL3-219ENST00000495172 C5orf67F2Z3F1 127 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 AOC1P19801 751 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 CPT1AP50416 773 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 HIC1Q14526 733 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 FIBCD1Q8N539 461 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 CCDC155Q8N6L0 562 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 CCER1Q8TC90 406 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-219ENST00000495172 SDR42E1Q8WUS8 393 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 C11orf84Q9BUA3 381 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-219ENST00000495172 LMAN2LQ9H0V9 348 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 PLAGL2Q9UPG8 496 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 CACNA1IQ9P0X4 2223 aa10.77□□□□□ -0.69
GARNL3-219ENST00000495172 DMXL2Q8TDJ6 3036 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 BAZ2AQ9UIF9 1905 aaKnown RBP10.76□□□□□ -0.69
GARNL3-219ENST00000495172 ASB14A6NK59 587 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 EFCAB14O75071 495 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 IDH1O75874 414 aaKnown RBP10.76□□□□□ -0.69
GARNL3-219ENST00000495172 ITGB1P05556 798 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 ATF7P17544 494 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-219ENST00000495172 MUM1L1Q5H9M0 696 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 UBALD2Q8IYN6 164 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 FEZF2Q8TBJ5 459 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 S1PR5Q9H228 398 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 SH2D4AQ9H788 454 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 COPRSQ9NQ92 184 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 HDAC6Q9UBN7 1215 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 AKAP2Q9Y2D5 859 aa10.76□□□□□ -0.69
GARNL3-219ENST00000495172 ZBED4O75132 1171 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 PPFIA3O75145 1194 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 PTPN11Q06124 597 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-219ENST00000495172 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.75□□□□□ -0.69
GARNL3-219ENST00000495172 CHST13Q8NET6 341 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 KAT2BQ92831 832 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 IL17RAQ96F46 866 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 DBNDD2Q9BQY9 259 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 ALG1Q9BT22 464 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 SEMA4AQ9H3S1 761 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 ERVK-5Q9HDB9 667 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 RNF146Q9NTX7 359 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 LIMD1Q9UGP4 676 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 ZMIZ1Q9ULJ6 1067 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 CTDP1Q9Y5B0 961 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-219ENST00000495172 LAMA5O15230 3695 aa10.75□□□□□ -0.69
GARNL3-219ENST00000495172 USP17L12C9JPN9 530 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 USP17L21D6R901 530 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 ATP2A1O14983 1001 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 NDUFB10O96000 172 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 SP9P0CG40 484 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 RBL2Q08999 1139 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 PLEKHG4Q58EX7 1191 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 LLGL2Q6P1M3 1020 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 SPPL3Q8TCT6 385 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 RIOK1Q9BRS2 568 aaKnown RBP10.74□□□□□ -0.69
GARNL3-219ENST00000495172 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
GARNL3-219ENST00000495172 POMKQ9H5K3 350 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 ANTXR1Q9H6X2 564 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 GOPCQ9HD26 462 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 VTA1Q9NP79 307 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 PARD6AQ9NPB6 346 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 NCDNQ9UBB6 729 aa10.74□□□□□ -0.69
GARNL3-219ENST00000495172 IGSF10Q6WRI0 2623 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 POTEMA6NI47 508 aa10.73□□□□□ -0.69
GARNL3-219ENST00000495172 A6NJR5 290 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms