RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CSF2RAP15509 400 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 ARHGAP1Q07960 439 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 PGM5Q15124 567 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 SGMS1Q86VZ5 419 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 TMEM199Q8N511 208 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 ZFP91Q96JP5 570 aaPredicted RBP18.04■□□□□ 0.48
LIMS2-216ENST00000494613 MYH6P13533 1939 aa18.04■□□□□ 0.48
LIMS2-216ENST00000494613 PPIGQ13427 754 aaKnown RBP eCLIP18.03■□□□□ 0.48
LIMS2-216ENST00000494613 SYNE3Q6ZMZ3 975 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 HIPK3Q9H422 1215 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
LIMS2-216ENST00000494613 LTBP2Q14767 1821 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 LRRC37A2A6NM11 1700 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 SUPT20HL2P0C7V6 817 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 SP2Q02086 613 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 LAMC2Q13753 1193 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 TMEM240Q5SV17 173 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 FAM109BQ6ICB4 259 aaPredicted RBP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 KCNV1Q6PIU1 500 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 USP17L6PQ6QN14 398 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 KCNB2Q92953 911 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 SEC63Q9UGP8 760 aaKnown RBP18.02■□□□□ 0.48
LIMS2-216ENST00000494613 BRPF3Q9ULD4 1205 aa18.02■□□□□ 0.48
LIMS2-216ENST00000494613 UMODL1Q5DID0 1318 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 hCG_1642624A0A1W2PR95 340 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 MEIS2O14770 477 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 NEFLP07196 543 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 MMP3P08254 477 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 ACRP10323 421 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 TGFB3P10600 412 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
LIMS2-216ENST00000494613 CCND2P30279 289 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 CCL23P55773 120 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 CHMP4BP1P59074 171 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 KRT32Q14532 448 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 NFRKBQ6P4R8 1299 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 ZNF365Q70YC5 407 aa18.01■□□□□ 0.47
LIMS2-216ENST00000494613 EMID1Q96A84 441 aaPredicted RBP18.01■□□□□ 0.47
LIMS2-216ENST00000494613 NOC4LQ9BVI4 516 aaKnown RBP18.01■□□□□ 0.47
LIMS2-216ENST00000494613 CYP2C9P11712 490 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
LIMS2-216ENST00000494613 SMAD3P84022 425 aaKnown RBP18■□□□□ 0.47
LIMS2-216ENST00000494613 DGKDQ16760 1214 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 CELF3Q5SZQ8 465 aaKnown RBP18■□□□□ 0.47
LIMS2-216ENST00000494613 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 APOA5Q6Q788 366 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 TMTC3Q6ZXV5 915 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 SMARCC2Q8TAQ2 1214 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 KAT2BQ92831 832 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
LIMS2-216ENST00000494613 CUL5Q93034 780 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 PSTPIP2Q9H939 334 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 IL23AQ9NPF7 189 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 RTEL1Q9NZ71 1219 aa18■□□□□ 0.47
LIMS2-216ENST00000494613 LAMA2P24043 3122 aaKnown RBP18■□□□□ 0.47
LIMS2-216ENST00000494613 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-216ENST00000494613 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-216ENST00000494613 PIK3CDO00329 1044 aa17.99■□□□□ 0.47
LIMS2-216ENST00000494613 PPFIA4O75335 1185 aa17.99■□□□□ 0.47
LIMS2-216ENST00000494613 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
LIMS2-216ENST00000494613 HSPA4P34932 840 aa17.99■□□□□ 0.47
LIMS2-216ENST00000494613 PTPN11Q06124 597 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-216ENST00000494613 MICU3Q86XE3 530 aa17.99■□□□□ 0.47
LIMS2-216ENST00000494613 BCAS3Q9H6U6 928 aa17.99■□□□□ 0.47
LIMS2-216ENST00000494613 SORBS3O60504 671 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 FGBP02675 491 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 CPA1P15085 419 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 PPTC7Q8NI37 304 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 FAM161BQ96MY7 647 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 SEMA6BQ9H3T3 888 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 SNX14Q9Y5W7 946 aa17.98■□□□□ 0.47
LIMS2-216ENST00000494613 V9GY48 417 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-216ENST00000494613 SPATA31C2B4DYI2 1134 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 ZBTB43O43298 467 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 STAM2O75886 525 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 GGPS1O95749 300 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 FUT2Q10981 343 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 HSDL1Q3SXM5 330 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 RASIP1Q5U651 963 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 RPUSD2Q8IZ73 545 aaKnown RBP17.97■□□□□ 0.47
LIMS2-216ENST00000494613 SCLYQ96I15 445 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 SPATA33Q96N06 139 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 WNT8AQ9H1J5 351 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 MLXIPQ9HAP2 919 aa17.97■□□□□ 0.47
LIMS2-216ENST00000494613 FAM217BQ9NTX9 383 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-216ENST00000494613 RBM28Q9NW13 759 aaKnown RBP17.97■□□□□ 0.47
LIMS2-216ENST00000494613 ICAM3P32942 547 aa17.96■□□□□ 0.47
LIMS2-216ENST00000494613 HERVK_113Q902F9 699 aa17.96■□□□□ 0.47
LIMS2-216ENST00000494613 VWCEQ96DN2 955 aa17.96■□□□□ 0.47
LIMS2-216ENST00000494613 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
LIMS2-216ENST00000494613 INPP4AQ96PE3 977 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms