RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 ZNF764Q96H86 408 aaPredicted RBP3.75□□□□□ -1.81
PTPN12-212ENST00000494248 ADOQ96SZ5 270 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 PCDH18Q9HCL0 1135 aa3.75□□□□□ -1.81
PTPN12-212ENST00000494248 MEIS3P2A8K0S8 358 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 GREM1O60565 184 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 CNOT4O95628 575 aaKnown RBP3.74□□□□□ -1.81
PTPN12-212ENST00000494248 MCM7P33993 719 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 ANKRD39Q53RE8 183 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 FNDC7Q5VTL7 733 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 RCSD1Q6JBY9 416 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 CCDC144CPQ8IYA2 1237 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 PLEKHO2Q8TD55 490 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 ZSWIM3Q96MP5 696 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 TMEM168Q9H0V1 697 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 CSRNP2Q9H175 543 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 PODXL2Q9NZ53 605 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 WASF3Q9UPY6 502 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 ZNF451Q9Y4E5 1061 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 FHOD1Q9Y613 1164 aa3.74□□□□□ -1.81
PTPN12-212ENST00000494248 ANKRD33BA6NCL7 494 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 SUPT5HO00267 1087 aaKnown RBP3.73□□□□□ -1.81
PTPN12-212ENST00000494248 C1SP09871 688 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 COL10A1Q03692 680 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 NOL9Q5SY16 702 aaKnown RBP3.73□□□□□ -1.81
PTPN12-212ENST00000494248 GK5Q6ZS86 529 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 ZNF627Q7L945 461 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 ERMP1Q7Z2K6 904 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 LARP4BQ92615 738 aaKnown RBP3.73□□□□□ -1.81
PTPN12-212ENST00000494248 ZDHHC15Q96MV8 337 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 FAM161BQ96MY7 647 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 NOL6Q9H6R4 1146 aaKnown RBP3.73□□□□□ -1.81
PTPN12-212ENST00000494248 L2HGDHQ9H9P8 463 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 COPRSQ9NQ92 184 aa3.73□□□□□ -1.81
PTPN12-212ENST00000494248 FUCA1P04066 466 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 ERBB2P04626 1255 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 CD247P20963 164 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 AGBL4Q5VU57 503 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 MBLAC2Q68D91 279 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 Q6ZSN1 163 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 REXO1Q8N1G1 1221 aaKnown RBP3.72□□□□□ -1.81
PTPN12-212ENST00000494248 DPF3Q92784 378 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 KBTBD4Q9NVX7 518 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.72□□□□□ -1.81
PTPN12-212ENST00000494248 SUPT16HQ9Y5B9 1047 aaKnown RBP3.72□□□□□ -1.81
PTPN12-212ENST00000494248 DMRT1Q9Y5R6 373 aa3.72□□□□□ -1.81
PTPN12-212ENST00000494248 C7orf72A4D263 438 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 PATL2C9JE40 543 aaKnown RBP3.71□□□□□ -1.82
PTPN12-212ENST00000494248 STXBP3O00186 592 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 AURKAO14965 403 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 U2SURPO15042 1029 aaKnown RBP3.71□□□□□ -1.82
PTPN12-212ENST00000494248 PPFIA2O75334 1257 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 KRT4P19013 534 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 PMS1P54277 932 aaKnown RBP3.71□□□□□ -1.82
PTPN12-212ENST00000494248 XPCQ01831 940 aaPredicted RBP3.71□□□□□ -1.82
PTPN12-212ENST00000494248 NFATC3Q12968 1075 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 LRRFIP1Q32MZ4 808 aaKnown RBP3.71□□□□□ -1.82
PTPN12-212ENST00000494248 EEF1DP3Q658K8 133 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 Q6ZPA2 131 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 FAM126BQ8IXS8 530 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 KLHL36Q8N4N3 616 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 RGS22Q8NE09 1264 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 FAM86C1Q9NVL1 165 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 ZDHHC9Q9Y397 364 aa3.71□□□□□ -1.82
PTPN12-212ENST00000494248 SORBS3O60504 671 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 TP53P04637 393 aaPredicted RBP3.7□□□□□ -1.82
PTPN12-212ENST00000494248 COL6A1P12109 1028 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 EIF4A3P38919 411 aaKnown RBP3.7□□□□□ -1.82
PTPN12-212ENST00000494248 PPP2R5DQ14738 602 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 SEZ6Q53EL9 994 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 FBXO33Q7Z6M2 555 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 ZC3H18Q86VM9 953 aaKnown RBP3.7□□□□□ -1.82
PTPN12-212ENST00000494248 IL17DQ8TAD2 202 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 CACTINQ8WUQ7 758 aaKnown RBP3.7□□□□□ -1.82
PTPN12-212ENST00000494248 EDAQ92838 391 aa3.7□□□□□ -1.82
PTPN12-212ENST00000494248 SF3B6Q9Y3B4 125 aaKnown RBP3.7□□□□□ -1.82
PTPN12-212ENST00000494248 CBFA2T2O43439 604 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 VAMP4O75379 141 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 ITGAEP38570 1179 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 HS1BP3Q53T59 392 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 INTS3Q68E01 1043 aaKnown RBP3.69□□□□□ -1.82
PTPN12-212ENST00000494248 NUDT10Q8NFP7 164 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 SMARCC1Q92922 1105 aaPredicted RBP3.69□□□□□ -1.82
PTPN12-212ENST00000494248 NUDT11Q96G61 164 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 DHRS1Q96LJ7 313 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 MMRN2Q9H8L6 949 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 UBP1Q9NZI7 540 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 ADAM29Q9UKF5 820 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 CROTQ9UKG9 612 aa3.69□□□□□ -1.82
PTPN12-212ENST00000494248 ZYXQ15942 572 aaKnown RBP3.68□□□□□ -1.82
PTPN12-212ENST00000494248 DPY19L1Q2PZI1 675 aa3.68□□□□□ -1.82
PTPN12-212ENST00000494248 DNAJC14Q6Y2X3 702 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-212ENST00000494248 DCP2Q8IU60 420 aaKnown RBP3.68□□□□□ -1.82
PTPN12-212ENST00000494248 ZNF296Q8WUU4 475 aaPredicted RBP3.68□□□□□ -1.82
PTPN12-212ENST00000494248 LRRC37BQ96QE4 947 aa3.68□□□□□ -1.82
PTPN12-212ENST00000494248 SEC61A2Q9H9S3 476 aa3.68□□□□□ -1.82
PTPN12-212ENST00000494248 ZNF165P49910 485 aa3.67□□□□□ -1.82
PTPN12-212ENST00000494248 CCDC142Q17RM4 750 aa3.67□□□□□ -1.82
PTPN12-212ENST00000494248 SND1Q7KZF4 910 aaKnown RBP eCLIP3.67□□□□□ -1.82
PTPN12-212ENST00000494248 MILR1Q7Z6M3 343 aa3.67□□□□□ -1.82
PTPN12-212ENST00000494248 NPM2Q86SE8 214 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms