RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RNF34Q969K3 372 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 SLC38A3Q99624 504 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 LGR4Q9BXB1 951 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 CHST7Q9NS84 486 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZMYM5Q9UJ78 669 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 BCORQ6W2J9 1755 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 SCN11AQ9UI33 1791 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 RIMS2Q9UQ26 1411 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 TRAPPC8Q9Y2L5 1435 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 MYH7P12883 1935 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 COL18A1P39060 1754 aa3.38□□□□□ -1.87
CDC42EP3-205ENST00000494083 LRRC56Q8IYG6 542 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 FAM169BQ8N8A8 192 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 DAGLBQ8NCG7 672 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 ASCC2Q9H1I8 757 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 SUCOQ9UBS9 1254 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 FBXL21Q9UKT6 434 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 CDK11AQ9UQ88 783 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 EFR3BQ9Y2G0 817 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 YBX2Q9Y2T7 364 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 HCFC2Q9Y5Z7 792 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RTL1A6NKG5 1358 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 MST1RQ04912 1400 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 IFNGR1P15260 489 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 DEKP35659 375 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 FBXO15Q8NCQ5 510 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 SIN3AQ96ST3 1273 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 PCDHB12Q9Y5F1 795 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RGPD3A6NKT7 1758 aaPredicted RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RGPD4Q7Z3J3 1758 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 ARFGEF2Q9Y6D5 1785 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 AATKQ6ZMQ8 1374 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 TOGARAM1Q9Y4F4 1720 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 FITM1A5D6W6 292 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RAP1GAPP47736 663 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RNF4P78317 190 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 RTP2Q5QGT7 225 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 LINC00116Q8NCU8 138 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 GCM1Q9NP62 436 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 FAM53CQ9NYF3 392 aa3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 NOP58Q9Y2X3 529 aaKnown RBP3.37□□□□□ -1.87
CDC42EP3-205ENST00000494083 PDE6BP35913 854 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 PCBP3P57721 371 aaKnown RBP3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 UNC5AQ6ZN44 842 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 NLRX1Q86UT6 975 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 CCDC144CPQ8IYA2 1237 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 OXR1Q8N573 874 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 CD320Q9NPF0 282 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 C1orf167Q5SNV9 1468 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 RGPD5Q99666 1765 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 RAD50Q92878 1312 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 CD109Q6YHK3 1445 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 EPHB3P54753 998 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 RTP1P59025 263 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF445P59923 1031 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 NR0B2Q15466 257 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 KCNA10Q16322 511 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 TMEM52Q8NDY8 209 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 ACBD3Q9H3P7 528 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 NOL6Q9H6R4 1146 aaKnown RBP3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 FBLN5Q9UBX5 448 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 RGPD8O14715 1765 aaPredicted RBP3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 MYBBP1AQ9BQG0 1328 aaKnown RBP3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 MSL3P1P0C860 447 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 SSPNQ14714 243 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 MCMBPQ9BTE3 642 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 TECPR2O15040 1411 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 LAMB1P07942 1786 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 MYH13Q9UKX3 1938 aa3.36□□□□□ -1.87
CDC42EP3-205ENST00000494083 SCAMP3O14828 347 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZSCAN22P10073 491 aaPredicted RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 LINC00310P59036 64 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 RNF111Q6ZNA4 994 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 ANKS4BQ8N8V4 417 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 KCNN1Q92952 543 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 METTL5Q9NRN9 209 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 IMPACTQ9P2X3 320 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZNF451Q9Y4E5 1061 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 PXDNLA1KZ92 1463 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 TCERG1O14776 1098 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 GUCY2CP25092 1073 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 RAD51AP2Q09MP3 1159 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 FIBCD1Q8N539 461 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 PANK1Q8TE04 598 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 ZDHHC15Q96MV8 337 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 MPHOSPH9Q99550 1183 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 DSCC1Q9BVC3 393 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 IRF2BPLQ9H1B7 796 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 IGSF5Q9NSI5 407 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 DUOX1Q9NRD9 1551 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 FADS2P1A8MWK0 482 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 NFIBO00712 420 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 HSP90B1P14625 803 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 CDK11BP21127 795 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 TACR1P25103 407 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 CCNFP41002 786 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 PMS1P54277 932 aaKnown RBP3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 NCKAP1LP55160 1127 aa3.35□□□□□ -1.87
CDC42EP3-205ENST00000494083 RRP1P56182 461 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms