RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 KLF18A0A0U1RQI7 1052 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PDE2AO00408 941 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 RTN3O95197 1032 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 TCP1P17987 556 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 KCTD16Q68DU8 428 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 KIRREL3Q8IZU9 778 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 SEC16BQ96JE7 1060 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CCDC43Q96MW1 224 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 HAUS7Q99871 368 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 JADE2Q9NQC1 790 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 BAIAP2L1Q9UHR4 511 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 DMGDHQ9UI17 866 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 SNX12Q9UMY4 172 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 MYO3BQ8WXR4 1341 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 YDJCA8MPS7 323 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 TRAPPC3O43617 180 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CAND2O75155 1236 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PAEPP09466 180 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 HERVK_113P62684 666 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 IMMTQ16891 758 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 ACCSLQ4AC99 568 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 KRT40Q6A162 431 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 LRIG3Q6UXM1 1119 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 SAPCD2Q86UD0 394 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 SPATA4Q8NEY3 305 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 WHAMMQ8TF30 809 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 HVCN1Q96D96 273 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 GMLQ99445 158 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 ALG1Q9BT22 464 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 METTL22Q9BUU2 404 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CHPF2Q9P2E5 772 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 TRIM10Q9UDY6 481 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 ZNF233A6NK53 670 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 POLR2DO15514 142 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 KRT14P02533 472 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PTPREP23469 700 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 EPS15P42566 896 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PAFAH1B1P43034 410 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 GMPSP49915 693 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 COPB1P53618 953 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 ROR2Q01974 943 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 BLMHQ13867 455 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 TRIM29Q14134 588 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 AOC3Q16853 763 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 GKAP1Q5VSY0 366 aaPredicted RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CWF19L1Q69YN2 538 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 C8orf74Q6P047 294 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CREG2Q8IUH2 290 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 KLHL23Q8NBE8 558 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 CCT6BQ92526 530 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 EDC3Q96F86 508 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 STAMBPL1Q96FJ0 436 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 DNAJC7Q99615 494 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 NUP58Q9BVL2 599 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 PPANQ9NQ55 473 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 TRMT112Q9UI30 125 aaKnown RBP7.8□□□□□ -1.16
EPHA3-203ENST00000494014 HPS5Q9UPZ3 1129 aa7.8□□□□□ -1.16
EPHA3-203ENST00000494014 ENO4A6NNW6 628 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 GRM8O00222 908 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ABLIM1O14639 778 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 PDE8AO60658 829 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ANP32DO95626 131 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 GCLCP48506 637 aaPredicted RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 MKRN4PQ13434 485 aaPredicted RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 KRT31Q15323 416 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 CCDC181Q5TID7 509 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 HAUS3Q68CZ6 603 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 HIBCHQ6NVY1 386 aaPredicted RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 TEX9Q8N6V9 391 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 CCDC63Q8NA47 563 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ZFAND2BQ8WV99 257 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 THOC1Q96FV9 657 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 GSDMAQ96QA5 445 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 CHP1Q99653 195 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 LUC7L2Q9Y383 392 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 GOLGA6L10A0A0M3HER8 536 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 H7C1W4 665 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 SH2B2O14492 632 aaPredicted RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ACTN4O43707 911 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 TACC1O75410 805 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 EIF2S2P20042 333 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ATP2B4P23634 1241 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 PAPOLAP51003 745 aaKnown RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 BIRC3Q13489 604 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 TTF1Q15361 905 aaPredicted RBP7.79□□□□□ -1.16
EPHA3-203ENST00000494014 PPP1R7Q15435 360 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 KSR2Q6VAB6 950 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 LINS1Q8NG48 757 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 TBC1D31Q96DN5 1066 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 CAPNS2Q96L46 248 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 ALS2CR12Q96Q35 445 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 GDF3Q9NR23 364 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 RNF14Q9UBS8 474 aa7.79□□□□□ -1.16
EPHA3-203ENST00000494014 SWAP70Q9UH65 585 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms