RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MRPS9P82933 396 aaKnown RBP14.61□□□□□ -0.07
HSPG2-212ENST00000493940 NBPF20Q3BBV1 942 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 NFXL1Q6ZNB6 911 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 VSIG10LQ86VR7 867 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 AFG1LQ8WV93 481 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 KAT2BQ92831 832 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 NEK1Q96PY6 1258 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 CTAGE1Q96RT6 745 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.61□□□□□ -0.078e-8■■■■■ 29.9
HSPG2-212ENST00000493940 FAM217BQ9NTX9 383 aaPredicted RBP14.61□□□□□ -0.07
HSPG2-212ENST00000493940 TRMT13Q9NUP7 481 aaKnown RBP14.61□□□□□ -0.07
HSPG2-212ENST00000493940 CHD9Q3L8U1 2897 aa14.61□□□□□ -0.07
HSPG2-212ENST00000493940 PRUNE2Q8WUY3 3088 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 CCDC69A6NI79 296 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 MEIS2O14770 477 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 EIF3JO75822 258 aaKnown RBP14.6□□□□□ -0.07
HSPG2-212ENST00000493940 CABYRO75952 493 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 ACRP10323 421 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 FUT2Q10981 343 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 SEMA3FQ13275 785 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 TTLL4Q14679 1199 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 MFSD5Q6N075 450 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 USP17L6PQ6QN14 398 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 SGMS1Q86VZ5 419 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 FANCBQ8NB91 859 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 CTCFLQ8NI51 663 aaPredicted RBP14.6□□□□□ -0.07
HSPG2-212ENST00000493940 WNT8AQ9H1J5 351 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 ALDH8A1Q9H2A2 487 aaPredicted RBP14.6□□□□□ -0.07
HSPG2-212ENST00000493940 SNX14Q9Y5W7 946 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 WDR81Q562E7 1941 aa14.6□□□□□ -0.07
HSPG2-212ENST00000493940 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-212ENST00000493940 NKRFO15226 690 aaKnown RBP eCLIP14.59□□□□□ -0.07
HSPG2-212ENST00000493940 ZEB2O60315 1214 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 CYP2C9P11712 490 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 SMARCA1P28370 1054 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 CDC27P30260 824 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 FPGSQ05932 587 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 TMEM240Q5SV17 173 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 APOA5Q6Q788 366 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 TMTC3Q6ZXV5 915 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
HSPG2-212ENST00000493940 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 TMTC2Q8N394 836 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 GUCD1Q96NT3 240 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 NOC4LQ9BVI4 516 aaKnown RBP14.59□□□□□ -0.07
HSPG2-212ENST00000493940 COL25A1Q9BXS0 654 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-212ENST00000493940 POLR3EQ9NVU0 708 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 MROH7Q68CQ1 1323 aa14.59□□□□□ -0.07
HSPG2-212ENST00000493940 ADAMTS3O15072 1205 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 GH1P01241 217 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 MMP3P08254 477 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 HSPA4P34932 840 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 CPT1AP50416 773 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 CCL23P55773 120 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 HIC1Q14526 733 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.58□□□□□ -0.08
HSPG2-212ENST00000493940 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
HSPG2-212ENST00000493940 SCLYQ96I15 445 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 MTG1Q9BT17 334 aaPredicted RBP14.58□□□□□ -0.08
HSPG2-212ENST00000493940 MAP3K20Q9NYL2 800 aaKnown RBP14.58□□□□□ -0.08
HSPG2-212ENST00000493940 SLC12A7Q9Y666 1083 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 FRMPD4Q14CM0 1322 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 CNTNAP5Q8WYK1 1306 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 CHD7Q9P2D1 2997 aa14.58□□□□□ -0.08
HSPG2-212ENST00000493940 LOXHD1Q8IVV2 1947 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 B4DLN1 442 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 MRPL12P52815 198 aaKnown RBP14.57□□□□□ -0.08
HSPG2-212ENST00000493940 UBE2SQ16763 222 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 HSDL1Q3SXM5 330 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 RNF20Q5VTR2 975 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 MYSM1Q5VVJ2 828 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 ZNF365Q70YC5 407 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 SAMD3Q8N6K7 520 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 FAM161BQ96MY7 647 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 MPHOSPH6Q99547 160 aaKnown RBP14.57□□□□□ -0.08
HSPG2-212ENST00000493940 HIPK3Q9H422 1215 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 RTEL1Q9NZ71 1219 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 REV3LO60673 3130 aa14.57□□□□□ -0.08
HSPG2-212ENST00000493940 GRXCR1A8MXD5 290 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 TLR3O15455 904 aaKnown RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 KIF5BP33176 963 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 CHMP4BP1P59074 171 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 APOBRQ0VD83 1088 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 CELF3Q5SZQ8 465 aaKnown RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 GDF6Q6KF10 455 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 EMID1Q96A84 441 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 TTYH1Q9H313 450 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 CXXC1Q9P0U4 656 aaPredicted RBP14.56□□□□□ -0.08
HSPG2-212ENST00000493940 MRVI1Q9Y6F6 885 aa14.56□□□□□ -0.08
HSPG2-212ENST00000493940 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 GGPS1O95749 300 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 CALM1P0DP23 149 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 CALM2P0DP24 149 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 CALM3P0DP25 149 aa14.55□□□□□ -0.08
HSPG2-212ENST00000493940 UBA1P22314 1058 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms