RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 AP5M1Q9H0R1 490 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 VTA1Q9NP79 307 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 PDGFCQ9NRA1 345 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 CNTNAP5Q8WYK1 1306 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 NCOR1O75376 2440 aa11.99□□□□□ -0.49
TRAPPC12-222ENST00000493792 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 CPLX1O14810 134 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 DUSP11O75319 330 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 RAG1P15918 1043 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PDIA3P30101 505 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PBX2P40425 430 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 HSD17B4P51659 736 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 NAPAP54920 295 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PPP2R5BQ15173 497 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 C8orf34Q49A92 452 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 RASIP1Q5U651 963 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 ADAMTS19Q8TE59 1207 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 AGXT2Q9BYV1 514 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 WDR11Q9BZH6 1224 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 MAF1Q9H063 256 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 KATNBL1Q9H079 304 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 NCOA5Q9HCD5 579 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 MAP3K20Q9NYL2 800 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-222ENST00000493792 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 GRXCR1A8MXD5 290 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 DYNC1LI2O43237 492 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 ADCY6O43306 1168 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 ADAMTS4O75173 837 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 NR3C2P08235 984 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 FPGSQ05932 587 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 STXBP2Q15833 593 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 WWC2Q6AWC2 1192 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 IQSEC1Q6DN90 963 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 TAPT1Q6NXT6 567 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 USP17L6PQ6QN14 398 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 TLK2Q86UE8 772 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 FBXL16Q8N461 479 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 SAMD3Q8N6K7 520 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 MORC4Q8TE76 937 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 PPM1EQ8WY54 764 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 PHKBQ93100 1093 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 VTI1AQ96AJ9 217 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 FAM122AQ96E09 287 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 IWS1Q96ST2 819 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.97□□□□□ -0.492e-11■■■□□ 17
TRAPPC12-222ENST00000493792 TSEN34Q9BSV6 310 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 PSTPIP2Q9H939 334 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 UPF2Q9HAU5 1272 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 TMEM39AQ9NV64 488 aa11.97□□□□□ -0.49
TRAPPC12-222ENST00000493792 PQBP1O60828 265 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 TXNP10599 105 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 SMPD1P17405 629 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 PTGS1P23219 599 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 EDNRBP24530 442 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 CCND2P30279 289 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 NEK4P51957 841 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 MRPS5P82675 430 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 BEX3Q00994 111 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 FUT2Q10981 343 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 ANKRD1Q15327 319 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 UBE2SQ16763 222 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 TMEM240Q5SV17 173 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 CCSAPQ6IQ19 270 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 CPLX2Q6PUV4 134 aaKnown RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 PDCD2LQ9BRP1 358 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 SLKQ9H2G2 1235 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 PRDM12Q9H4Q4 367 aa11.96□□□□□ -0.49
TRAPPC12-222ENST00000493792 CHD9Q3L8U1 2897 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 A0A1W2PQ45 241 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 A0A1W2PQY0 241 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 MYADML2A6NDP7 307 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 MOXD2PA6NHM9 499 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 SPDYE3A6NKU9 549 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 TIMP1P01033 207 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 BMP1P13497 986 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 SCG2P13521 617 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 ADCY7P51828 1080 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 ACLYP53396 1101 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 AK2P54819 239 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 SSRP1Q08945 709 aaKnown RBP11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 TTLL4Q14679 1199 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 PGM5Q15124 567 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 KCNA10Q16322 511 aa11.95□□□□□ -0.5
TRAPPC12-222ENST00000493792 DUSP28Q4G0W2 176 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms