RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
LRCH3-218ENST00000493726 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
LRCH3-218ENST00000493726 UNCXA6NJT0 531 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 UBTFL1P0CB47 393 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-218ENST00000493726 HIBADHP31937 336 aaKnown RBP9.45□□□□□ -0.9
LRCH3-218ENST00000493726 SOX4Q06945 474 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-218ENST00000493726 NOGQ13253 232 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 POU4F3Q15319 338 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 PUM3Q15397 648 aaKnown RBP9.45□□□□□ -0.9
LRCH3-218ENST00000493726 MAP3K11Q16584 847 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 MEIS3Q99687 375 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 TRIM56Q9BRZ2 755 aaKnown RBP9.45□□□□□ -0.9
LRCH3-218ENST00000493726 SUGT1Q9Y2Z0 365 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
LRCH3-218ENST00000493726 FAM95CA0A1B0GW59 222 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 IPO8O15397 1037 aaKnown RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 CA12O43570 354 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 GADD45BO75293 160 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 BCAR3O75815 825 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 GNAI3P08754 354 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 ADH5P11766 374 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 GRIK1P39086 918 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 GYG1P46976 350 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 ZNF157P51786 506 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 HUNKP57058 714 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 LDLRAD1Q5T700 205 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 APOBEC3FQ8IUX4 373 aaKnown RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 KIAA0825Q8IV33 1275 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 C2orf69Q8N8R5 385 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 KLHDC4Q8TBB5 520 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 LPIN2Q92539 896 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 ABCB6Q9NP58 842 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 LRRFIP2Q9Y608 721 aaKnown RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 AOX1Q06278 1338 aa9.44□□□□□ -0.9
LRCH3-218ENST00000493726 PDS5AQ29RF7 1337 aaKnown RBP9.44□□□□□ -0.9
LRCH3-218ENST00000493726 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 B3GALT4O96024 378 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 CYP11A1P05108 521 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 F13BP05160 661 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 IL15P40933 162 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-218ENST00000493726 METTL24Q5JXM2 366 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 RGMBQ6NW40 437 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 EPS8L3Q8TE67 593 aaKnown RBP9.43□□□□□ -0.9
LRCH3-218ENST00000493726 TBC1D22AQ8WUA7 517 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-218ENST00000493726 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 SAGE1Q9NXZ1 904 aa9.43□□□□□ -0.9
LRCH3-218ENST00000493726 SOWAHDA6NJG2 315 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 CCDC85CA6NKD9 419 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 AOC2O75106 756 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 SPINK2P20155 84 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 ITPKAP23677 461 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 HNRNPUQ00839 825 aaKnown RBP eCLIP9.42□□□□□ -0.9
LRCH3-218ENST00000493726 MFSD14BQ5SR56 506 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 CORO1BQ9BR76 489 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 TNNQ9UQP3 1299 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 PCDHAC2Q9Y5I4 1007 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 ACTL7BQ9Y614 415 aa9.42□□□□□ -0.9
LRCH3-218ENST00000493726 RPAP1Q9BWH6 1393 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-218ENST00000493726 MYH13Q9UKX3 1938 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 PLIN1O60240 522 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 RAB6AP20340 208 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 ADMP35318 185 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 DLGAP5Q15398 846 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 CFAP100Q494V2 611 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 CAVIN4Q5BKX8 364 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 PAOXQ6QHF9 649 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 HHIPL2Q6UWX4 724 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 PI16Q6UXB8 463 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 DYMQ7RTS9 669 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 ZDHHC15Q96MV8 337 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 TEPSINQ96N21 525 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 CSRNP1Q96S65 589 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 KRTAP9-2Q9BYQ4 174 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 DEFB129Q9H1M3 183 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
LRCH3-218ENST00000493726 BIN2Q9UBW5 565 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-218ENST00000493726 OAS3Q9Y6K5 1087 aaKnown RBP9.41□□□□□ -0.9
LRCH3-218ENST00000493726 RFX7Q2KHR2 1363 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.4□□□□□ -0.9
LRCH3-218ENST00000493726 GNAI2P04899 355 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.9
LRCH3-218ENST00000493726 RGS19P49795 217 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 GP2P55259 537 aaKnown RBP9.4□□□□□ -0.9
LRCH3-218ENST00000493726 GRM2Q14416 872 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 ZKSCAN2Q63HK3 967 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 APOBEC3HQ6NTF7 200 aaKnown RBP9.4□□□□□ -0.9
LRCH3-218ENST00000493726 TMEM57Q8N5G2 664 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 SSH3Q8TE77 659 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 AP4E1Q9UPM8 1137 aa9.4□□□□□ -0.9
LRCH3-218ENST00000493726 OTOFQ9HC10 1997 aa9.39□□□□□ -0.91
LRCH3-218ENST00000493726 HTTP42858 3142 aa9.39□□□□□ -0.91
LRCH3-218ENST00000493726 PNMA6EA0A0J9YXQ4 647 aa9.39□□□□□ -0.91
LRCH3-218ENST00000493726 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms