RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 NKX3-2P78367 333 aa5.47□□□□□ -1.53
SYCP1-208ENST00000493377 LMNB2Q03252 620 aa5.47□□□□□ -1.53
SYCP1-208ENST00000493377 MAMDC4Q6UXC1 1216 aa5.47□□□□□ -1.53
SYCP1-208ENST00000493377 REXO2Q9Y3B8 237 aaKnown RBP5.47□□□□□ -1.53
SYCP1-208ENST00000493377 LMNAP02545 664 aaKnown RBP5.46□□□□□ -1.54
SYCP1-208ENST00000493377 NTRK1P04629 796 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 CAMK2GQ13555 558 aaPredicted RBP5.46□□□□□ -1.54
SYCP1-208ENST00000493377 REC114Q7Z4M0 266 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 ZSWIM3Q96MP5 696 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 CNNM2Q9H8M5 875 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.46□□□□□ -1.54
SYCP1-208ENST00000493377 WWC3Q9ULE0 1092 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 SLC30A1Q9Y6M5 507 aa5.46□□□□□ -1.54
SYCP1-208ENST00000493377 FSTL1Q12841 308 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 MPP2Q14168 576 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 GPR162Q16538 588 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 CR1LQ2VPA4 569 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 OVOS1Q6IE37 1185 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 TMEM192Q8IY95 271 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 C7orf61Q8IZ16 206 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 PDGFDQ9GZP0 370 aaPredicted RBP5.45□□□□□ -1.54
SYCP1-208ENST00000493377 RIOX1Q9H6W3 641 aa5.45□□□□□ -1.54
SYCP1-208ENST00000493377 IKBKBO14920 756 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 PPP1R11O60927 126 aaPredicted RBP5.44□□□□□ -1.54
SYCP1-208ENST00000493377 RHOBTB3O94955 611 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 IFNGR1P15260 489 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 RCSD1Q6JBY9 416 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 IFNL2Q8IZJ0 200 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 NOC4LQ9BVI4 516 aaKnown RBP5.44□□□□□ -1.54
SYCP1-208ENST00000493377 GULP1Q9UBP9 304 aa5.44□□□□□ -1.54
SYCP1-208ENST00000493377 SHOXO15266 292 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 STAT5AP42229 794 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 MAPK7Q13164 816 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 EEF1DP3Q658K8 133 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 TRMT10BQ6PF06 316 aaKnown RBP5.43□□□□□ -1.54
SYCP1-208ENST00000493377 RPUSD2Q8IZ73 545 aaKnown RBP5.43□□□□□ -1.54
SYCP1-208ENST00000493377 SLC6A18Q96N87 628 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 BBC3Q96PG8 261 aaPredicted RBP5.43□□□□□ -1.54
SYCP1-208ENST00000493377 CROTQ9UKG9 612 aa5.43□□□□□ -1.54
SYCP1-208ENST00000493377 PEX11BO96011 259 aa5.42□□□□□ -1.54
SYCP1-208ENST00000493377 PROZP22891 400 aa5.42□□□□□ -1.54
SYCP1-208ENST00000493377 TXNDC2Q86VQ3 553 aa5.42□□□□□ -1.54
SYCP1-208ENST00000493377 NEIL1Q96FI4 390 aaPredicted RBP5.42□□□□□ -1.54
SYCP1-208ENST00000493377 SGSM2O43147 1006 aa5.41□□□□□ -1.54
SYCP1-208ENST00000493377 CD3EP07766 207 aa5.41□□□□□ -1.54
SYCP1-208ENST00000493377 NLRC3Q7RTR2 1065 aa5.41□□□□□ -1.54
SYCP1-208ENST00000493377 SEC14L1Q92503 715 aa5.41□□□□□ -1.54
SYCP1-208ENST00000493377 KRTAP4-4Q9BYR3 166 aa5.41□□□□□ -1.54
SYCP1-208ENST00000493377 SF3B6Q9Y3B4 125 aaKnown RBP5.41□□□□□ -1.54
SYCP1-208ENST00000493377 ATE1O95260 518 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 GCP02774 474 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 PF4P02776 101 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 POU3F3P20264 500 aaPredicted RBP5.4□□□□□ -1.54
SYCP1-208ENST00000493377 MAPK1P28482 360 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 SCRN1Q12765 414 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 GAREM2Q75VX8 874 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 ATG4CQ96DT6 458 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 TMEM209Q96SK2 561 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 YIPF4Q9BSR8 244 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 CEP72Q9P209 647 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 ZNHIT2Q9UHR6 403 aa5.4□□□□□ -1.54
SYCP1-208ENST00000493377 GNA15P30679 374 aa5.39□□□□□ -1.55
SYCP1-208ENST00000493377 GRM7Q14831 915 aa5.39□□□□□ -1.55
SYCP1-208ENST00000493377 NOL9Q5SY16 702 aaKnown RBP5.39□□□□□ -1.55
SYCP1-208ENST00000493377 Q6ZUG5 572 aa5.39□□□□□ -1.55
SYCP1-208ENST00000493377 ADGRG3Q86Y34 549 aa5.39□□□□□ -1.55
SYCP1-208ENST00000493377 FHOD1Q9Y613 1164 aa5.39□□□□□ -1.55
SYCP1-208ENST00000493377 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
SYCP1-208ENST00000493377 GPR150Q8NGU9 434 aa5.38□□□□□ -1.55
SYCP1-208ENST00000493377 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
SYCP1-208ENST00000493377 ZAR1LA6NP61 321 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 FUCA1P04066 466 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 SLC6A11P48066 632 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 ZNF445P59923 1031 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 RAC3P60763 192 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 GRASPQ7Z6J2 395 aaPredicted RBP5.37□□□□□ -1.55
SYCP1-208ENST00000493377 FIBCD1Q8N539 461 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 AJUBAQ96IF1 538 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 RHOVQ96L33 236 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 PARPBPQ9NWS1 579 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 PCDHB14Q9Y5E9 798 aa5.37□□□□□ -1.55
SYCP1-208ENST00000493377 KLHL18O94889 574 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 COL6A1P12109 1028 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 ZNF568Q3ZCX4 644 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 MILR1Q7Z6M3 343 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 CCDC144CPQ8IYA2 1237 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 C9orf106Q8NAJ2 232 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 SUCOQ9UBS9 1254 aaKnown RBP5.36□□□□□ -1.55
SYCP1-208ENST00000493377 USTQ9Y2C2 406 aa5.36□□□□□ -1.55
SYCP1-208ENST00000493377 CSF2RBP32927 897 aa5.35□□□□□ -1.55
SYCP1-208ENST00000493377 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
SYCP1-208ENST00000493377 ZNF808Q8N4W9 903 aaPredicted RBP5.35□□□□□ -1.55
SYCP1-208ENST00000493377 PLEKHO2Q8TD55 490 aa5.35□□□□□ -1.55
SYCP1-208ENST00000493377 DHRS1Q96LJ7 313 aa5.35□□□□□ -1.55
SYCP1-208ENST00000493377 TRBV23OR9-2A0A075B6M9 112 aa5.34□□□□□ -1.55
SYCP1-208ENST00000493377 SOWAHDA6NJG2 315 aa5.34□□□□□ -1.55
SYCP1-208ENST00000493377 TNFRSF10CO14798 259 aa5.34□□□□□ -1.55
SYCP1-208ENST00000493377 NPHS1O60500 1241 aa5.34□□□□□ -1.55
SYCP1-208ENST00000493377 HIBADHP31937 336 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms