RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 USP14P54578 494 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 CRHR2Q13324 411 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 TBC1D10BQ4KMP7 808 aaPredicted RBP7.92□□□□□ -1.14
HERC4-211ENST00000492996 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 NFE2L3Q9Y4A8 694 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 GBF1Q92538 1859 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 BTBD19C9JJ37 291 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 HOXD8P13378 290 aaPredicted RBP7.92□□□□□ -1.14
HERC4-211ENST00000492996 FCGRTP55899 365 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 DGKZQ13574 1117 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 PFKFB3Q16875 520 aaPredicted RBP7.92□□□□□ -1.14
HERC4-211ENST00000492996 SESTD1Q86VW0 696 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 MXD3Q9BW11 206 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 BLZF1Q9H2G9 400 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 GSDMDP57764 484 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 CREBRFQ8IUR6 639 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 TNFRSF25Q93038 417 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 SLC10A4Q96EP9 437 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 PLIN2Q99541 437 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 TMEM47Q9BQJ4 181 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 TMX1Q9H3N1 280 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 SAMSN1Q9NSI8 373 aaKnown RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 NEMFO60524 1076 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 RASA1P20936 1047 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 NAA30Q147X3 362 aaPredicted RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 PTPN14Q15678 1187 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 SLC35G1Q2M3R5 365 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 BTNL9Q6UXG8 535 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 ZNF579Q8NAF0 562 aaKnown RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 TOX2Q96NM4 488 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 RABGAP1Q9Y3P9 1069 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 CYTH3O43739 400 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 CDK8P49336 464 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 DOK7Q18PE1 504 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 CEP135Q66GS9 1140 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 EP400NLQ6ZTU2 488 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 DGKHQ86XP1 1220 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 CLEC10AQ8IUN9 316 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 BLIDQ8IZY5 108 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 RASSF8Q8NHQ8 419 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 MED15Q96RN5 788 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 GDF15Q99988 308 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 CALCOCO1Q9P1Z2 691 aa7.91□□□□□ -1.14
HERC4-211ENST00000492996 ZNF219Q9P2Y4 722 aaPredicted RBP7.91□□□□□ -1.14
HERC4-211ENST00000492996 CCDC194A0A1B0GVG4 234 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 STRNO43815 780 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
HERC4-211ENST00000492996 INF2Q27J81 1249 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 ZNF710Q8N1W2 664 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 PAGE5Q96GU1 130 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 CCDC17Q96LX7 622 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 ZIC5Q96T25 663 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 MAPK8IP1Q9UQF2 711 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 PP2D1A8MPX8 630 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 KLRF2D3W0D1 207 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 SLFN14P0C7P3 912 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 MKRN4PQ13434 485 aaPredicted RBP7.9□□□□□ -1.14
HERC4-211ENST00000492996 MORC3Q14149 939 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 WWC2Q6AWC2 1192 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 CCSAPQ6IQ19 270 aaPredicted RBP7.9□□□□□ -1.14
HERC4-211ENST00000492996 CCAR2Q8N163 923 aaKnown RBP7.9□□□□□ -1.14
HERC4-211ENST00000492996 GPATCH11Q8N954 259 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 FERMT2Q96AC1 680 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 UBA5Q9GZZ9 404 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 IMPACTQ9P2X3 320 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 ZMYM2Q9UBW7 1377 aa7.9□□□□□ -1.14
HERC4-211ENST00000492996 SCN10AQ9Y5Y9 1956 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 FLT1P17948 1338 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 CD44P16070 742 aaKnown RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 CTGFP29279 349 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 ATP2C1P98194 919 aaPredicted RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 IL17AQ16552 155 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 E4F1Q66K89 784 aaPredicted RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 KANK3Q6NY19 840 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 MLKLQ8NB16 471 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 CCDC112Q8NEF3 446 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 CEP95Q96GE4 821 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 INTS13Q9NVM9 706 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 PI4KBQ9UBF8 816 aa7.9□□□□□ -1.15
HERC4-211ENST00000492996 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.9□□□□□ -1.15
HERC4-211ENST00000492996 V9GYY5 206 aaPredicted RBP7.9□□□□□ -1.15
HERC4-211ENST00000492996 G3V3G9 751 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CBFA2T2O43439 604 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 GTF2A1P52655 376 aaPredicted RBP7.89□□□□□ -1.15
HERC4-211ENST00000492996 GRM4Q14833 912 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 KARSQ15046 597 aaKnown RBP7.89□□□□□ -1.15
HERC4-211ENST00000492996 DCAF8Q5TAQ9 597 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CATSPERGQ6ZRH7 1159 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 C16orf86Q6ZW13 317 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CCDC150Q8NCX0 1101 aa7.89□□□□□ -1.15
HERC4-211ENST00000492996 CCDC34Q96HJ3 373 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms