RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 MICU3Q86XE3 530 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 TMTC2Q8N394 836 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 CCDC82Q8N4S0 544 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 RRP36Q96EU6 259 aaKnown RBP13.64□□□□□ -0.23
MDC1-207ENST00000492462 TRPV6Q9H1D0 765 aa13.64□□□□□ -0.23
MDC1-207ENST00000492462 A6NJR5 290 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
MDC1-207ENST00000492462 ZEB2O60315 1214 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 EIF3JO75822 258 aaKnown RBP13.63□□□□□ -0.23
MDC1-207ENST00000492462 TIMP1P01033 207 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 SMARCA1P28370 1054 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 CPT1AP50416 773 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 ARHGAP1Q07960 439 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 PGM5Q15124 567 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 APOA5Q6Q788 366 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 FANCBQ8NB91 859 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 AFG1LQ8WV93 481 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 GPKOWQ92917 476 aaPredicted RBP eCLIP13.63□□□□□ -0.23
MDC1-207ENST00000492462 KCNB2Q92953 911 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 LZTS2Q9BRK4 669 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 PPP1R12CQ9BZL4 782 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 POLR3EQ9NVU0 708 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
MDC1-207ENST00000492462 SNX14Q9Y5W7 946 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 UMODL1Q5DID0 1318 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
MDC1-207ENST00000492462 DOCK5Q9H7D0 1870 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 SORBS3O60504 671 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 B4GALT4O60513 344 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 CYP2C18P33260 490 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 HSPA4P34932 840 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 GNAQP50148 359 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 VSIG10LQ86VR7 867 aa13.62□□□□□ -0.23
MDC1-207ENST00000492462 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
MDC1-207ENST00000492462 MAP3K20Q9NYL2 800 aaKnown RBP13.62□□□□□ -0.23
MDC1-207ENST00000492462 MEIS2O14770 477 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 TLR3O15455 904 aaKnown RBP13.61□□□□□ -0.23
MDC1-207ENST00000492462 GH1P01241 217 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 CALM1P0DP23 149 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 CALM2P0DP24 149 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 CALM3P0DP25 149 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 FPGSQ05932 587 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 TRAF1Q13077 416 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 C16orf59Q7L2K0 433 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 SAMD3Q8N6K7 520 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 SNX27Q96L92 541 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 JAKMIP1Q96N16 626 aaKnown RBP13.61□□□□□ -0.23
MDC1-207ENST00000492462 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
MDC1-207ENST00000492462 BCAS3Q9H6U6 928 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 TRMT13Q9NUP7 481 aaKnown RBP13.61□□□□□ -0.23
MDC1-207ENST00000492462 PPP4R2Q9NY27 417 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 SEC63Q9UGP8 760 aaKnown RBP13.61□□□□□ -0.23
MDC1-207ENST00000492462 MRVI1Q9Y6F6 885 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
MDC1-207ENST00000492462 KLF18A0A0U1RQI7 1052 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 RBAK-RBAKDNI3L0D1 243 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 MMP3P08254 477 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 CYP2C9P11712 490 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 CSF2RAP15509 400 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 MRPS9P82933 396 aaKnown RBP13.6□□□□□ -0.23
MDC1-207ENST00000492462 SP2Q02086 613 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 FUT2Q10981 343 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 KRT32Q14532 448 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 MFSD5Q6N075 450 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 NOC4LQ9BVI4 516 aaKnown RBP13.6□□□□□ -0.23
MDC1-207ENST00000492462 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
MDC1-207ENST00000492462 FRMPD4Q14CM0 1322 aa13.6□□□□□ -0.23
MDC1-207ENST00000492462 CACNA1AO00555 2505 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 PIEZO1Q92508 2521 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 ZBTB43O43298 467 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 ACRP10323 421 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 CDC27P30260 824 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 CCND2P30279 289 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 APOBRQ0VD83 1088 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 UBE2SQ16763 222 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 RTN1Q16799 776 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 BRDTQ58F21 947 aaPredicted RBP13.59□□□□□ -0.23
MDC1-207ENST00000492462 FAM47CQ5HY64 1035 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 TYW1BQ6NUM6 668 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 Q6ZUG5 572 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 KAT2BQ92831 832 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 FAM161BQ96MY7 647 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.234e-10■■□□□ 12.1
MDC1-207ENST00000492462 WNT8AQ9H1J5 351 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 SCN5AQ14524 2016 aa13.59□□□□□ -0.23
MDC1-207ENST00000492462 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
MDC1-207ENST00000492462 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
MDC1-207ENST00000492462 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms