RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 BPIFA3Q9BQP9 254 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 PANK2Q9BZ23 570 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 MORF4L1Q9UBU8 362 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 MRPL11Q9Y3B7 192 aaKnown RBP11.59□□□□□ -0.55
HDAC3-210ENST00000490808 RABGAP1Q9Y3P9 1069 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 CTDP1Q9Y5B0 961 aaPredicted RBP11.59□□□□□ -0.55
HDAC3-210ENST00000490808 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
HDAC3-210ENST00000490808 SPDYE3A6NKU9 549 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 SLC26A4O43511 780 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 PTMAP06454 111 aaKnown RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 BCRP11274 1271 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 HOXD10P28358 340 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 OAZ1P54368 228 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 HERVK_113P62684 666 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 SHROOM1Q2M3G4 852 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 TREML2Q5T2D2 321 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 FBXO46Q6PJ61 603 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 MOXD1Q6UVY6 613 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 RASGRP4Q8TDF6 673 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 CCSER1Q9C0I3 900 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 LRRC27Q9C0I9 530 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 MAF1Q9H063 256 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 DNAJC25Q9H1X3 360 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 RPAP3Q9H6T3 665 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 CBX8Q9HC52 389 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.58□□□□□ -0.56
HDAC3-210ENST00000490808 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
HDAC3-210ENST00000490808 FLOT1O75955 427 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 DSG3P32926 999 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 CLK2P49760 499 aaKnown RBP11.57□□□□□ -0.56
HDAC3-210ENST00000490808 AMPD3Q01432 767 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 PDIA5Q14554 519 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 DHX8Q14562 1220 aaKnown RBP11.57□□□□□ -0.56
HDAC3-210ENST00000490808 ZYXQ15942 572 aaKnown RBP11.57□□□□□ -0.56
HDAC3-210ENST00000490808 CALCRLQ16602 461 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 LONRF3Q496Y0 759 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 MLKLQ8NB16 471 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 CALML4Q96GE6 196 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 PDLIM2Q96JY6 352 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 RMND1Q9NWS8 449 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 SERTAD1Q9UHV2 236 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 PPP1R9AQ9ULJ8 1098 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 PRR12Q9ULL5 1215 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 ADAMTS5Q9UNA0 930 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 A0A0G2JMZ2 1700 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 ABCB11O95342 1321 aa11.57□□□□□ -0.56
HDAC3-210ENST00000490808 ATP2A1O14983 1001 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 MAPK4P31152 587 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 SPECC1Q5M775 1068 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 FAM83BQ5T0W9 1011 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 RRAGBQ5VZM2 374 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 RASGRP2Q7LDG7 609 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-210ENST00000490808 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 PDILTQ8N807 584 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 SHCBP1Q8NEM2 672 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 GPRC5AQ8NFJ5 357 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 DHX58Q96C10 678 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 SLF1Q9BQI6 1058 aa11.56□□□□□ -0.56
HDAC3-210ENST00000490808 MAP3K20Q9NYL2 800 aaKnown RBP11.56□□□□□ -0.56
HDAC3-210ENST00000490808 COL11A1P12107 1806 aaPredicted RBP11.56□□□□□ -0.56
HDAC3-210ENST00000490808 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 SPDYE16A6NNV3 312 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 IKBKBO14920 756 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 TBX3O15119 743 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 ZBED4O75132 1171 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 ADCY5O95622 1261 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 SLC25A27O95847 323 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 CYP2C8P10632 490 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 STAT6P42226 847 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 FXR1P51114 621 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 FXR2P51116 673 aaKnown RBP eCLIP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 FCGRTP55899 365 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 NT5DC1Q5TFE4 455 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 KIFC2Q96AC6 838 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 EPSTI1Q96J88 318 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 CDK5RAP3Q96JB5 506 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 P2RX7Q99572 595 aaKnown RBP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 RANBP17Q9H2T7 1088 aaKnown RBP11.55□□□□□ -0.56
HDAC3-210ENST00000490808 DISC1Q9NRI5 854 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 PCDHA5Q9Y5H7 936 aa11.55□□□□□ -0.56
HDAC3-210ENST00000490808 GCOM1H8Y6P7 765 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 ACTN4O43707 911 aaKnown RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 STRNO43815 780 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 PPP1R11O60927 126 aaPredicted RBP11.54□□□□□ -0.56
HDAC3-210ENST00000490808 POLR2MP0CAP2 368 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 PPP1R2P41236 205 aa11.54□□□□□ -0.56
HDAC3-210ENST00000490808 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms