RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FSCN1Q16658 493 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 XP32Q5T750 250 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 ARMCX2Q7L311 632 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 RNF135Q8IUD6 432 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 WDR63Q8IWG1 891 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 FBXL6Q8N531 539 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 ATOH1Q92858 354 aaPredicted RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 PBXIP1Q96AQ6 731 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 PABPC5Q96DU9 382 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 TGS1Q96RS0 853 aaKnown RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 VCPKMTQ9H867 229 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 PRKRIP1Q9H875 184 aaPredicted RBP8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 TMX2Q9Y320 296 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 RIPK3Q9Y572 518 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 TNKSO95271 1327 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 ATG2AQ2TAZ0 1938 aa8.68□□□□□ -1.02
PDLIM1-203ENST00000490391 GJB5O95377 273 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 CYP2E1P05181 493 aaPredicted RBP8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 PTPRCP08575 1304 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 IQCF3P0C7M6 154 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 DEFB103AP81534 67 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 TRIP12Q14669 1992 aaPredicted RBP8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 GPNMBQ14956 572 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 TTC6Q86TZ1 520 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 CCDC144CPQ8IYA2 1237 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 MRPL38Q96DV4 380 aaKnown RBP8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 SNRKQ9NRH2 765 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 FAM50BQ9Y247 325 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 CEP295Q9C0D2 2601 aa8.67□□□□□ -1.02
PDLIM1-203ENST00000490391 NAV1Q8NEY1 1877 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 TNFAIP2Q03169 654 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 TMEM63BQ5T3F8 832 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 TMEM179Q6ZVK1 233 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 RAD9AQ99638 391 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 USB1Q9BQ65 265 aaKnown RBP8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 C17orf80Q9BSJ5 609 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 IRF2BPLQ9H1B7 796 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 ZZEF1O43149 2961 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 ASPMQ8IZT6 3477 aa8.66□□□□□ -1.02
PDLIM1-203ENST00000490391 GPR179Q6PRD1 2367 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 MYH8P13535 1937 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 H0Y858 1186 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 MPHOSPH10O00566 681 aaKnown RBP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 IGSF3O75054 1194 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 UQCRFS1P1P0C7P4 283 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 SUPT20HL2P0C7V6 817 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 UBTFL1P0CB47 393 aaPredicted RBP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 NBL1P41271 181 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 USP5P45974 858 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 KCNJ6P48051 423 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 TIGD5Q53EQ6 642 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 TCEAL5Q5H9L2 206 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 GORABQ5T7V8 394 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 SNRNP48Q6IEG0 339 aaKnown RBP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 MIGA1Q8NAN2 632 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 DDX11Q96FC9 970 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 FTOQ9C0B1 505 aaKnown RBP eCLIP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 PIH1D3Q9NQM4 214 aaKnown RBP8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 TLR9Q9NR96 1032 aa8.65□□□□□ -1.02
PDLIM1-203ENST00000490391 RBAK-RBAKDNI3L0D1 243 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ATP2A1O14983 1001 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 DYNC1LI2O43237 492 aaPredicted RBP8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 MBTPS2O43462 519 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 IGHA1P01876 353 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 CYP7A1P22680 504 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 AVPR2P30518 371 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ZXDAP98168 799 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ICA1Q05084 483 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 DLX2Q07687 328 aaPredicted RBP8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 DDX10Q13206 875 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 TCTN1Q2MV58 587 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 CERS3Q8IU89 383 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 FAM133AQ8N9E0 248 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 BANK1Q8NDB2 785 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ASIC4Q96FT7 647 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 SH2D4AQ9H788 454 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ARHGEF10LQ9HCE6 1279 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 MICAL3Q7RTP6 2002 aa8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 FLNBO75369 2602 aaKnown RBP8.64□□□□□ -1.03
PDLIM1-203ENST00000490391 ZEB2O60315 1214 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 AKR1B1P15121 316 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 PURAQ00577 322 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CNTN2Q02246 1040 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 HIC1Q14526 733 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CCDC184Q52MB2 194 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 TAPT1Q6NXT6 567 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 NOL8Q76FK4 1167 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 RPAINQ86UA6 219 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CNTNAP3BQ96NU0 1288 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms