RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 DNAH12Q6ZR08 3092 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 GRIN2DO15399 1336 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 ZBTB43O43298 467 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 LAMC2Q13753 1193 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 COL9A3Q14050 684 aaPredicted RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 C9orf50Q5SZB4 431 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 TMTC3Q6ZXV5 915 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 VSIG10LQ86VR7 867 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 DHX37Q8IY37 1157 aaKnown RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 RASEFQ8IZ41 740 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 AFG1LQ8WV93 481 aa20.12■□□□□ 0.81
SEC13-218ENST00000490283 ALDH8A1Q9H2A2 487 aaPredicted RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 DDX41Q9UJV9 622 aaKnown RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 NAP1L2Q9ULW6 460 aaPredicted RBP20.12■□□□□ 0.81
SEC13-218ENST00000490283 B4GALT4O60513 344 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 STAM2O75886 525 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 MMP3P08254 477 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
SEC13-218ENST00000490283 CHMP4BP1P59074 171 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 EXOSC10Q01780 885 aaKnown RBP20.11■□□□□ 0.81
SEC13-218ENST00000490283 ARHGAP1Q07960 439 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 DGKDQ16760 1214 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 RTN1Q16799 776 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 ADCK5Q3MIX3 580 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 GNPTABQ3T906 1256 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 ERICH6BQ5W0A0 696 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 CCDC82Q8N4S0 544 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 TRPV6Q9H1D0 765 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 PPP4R2Q9NY27 417 aa20.11■□□□□ 0.81
SEC13-218ENST00000490283 TGFB3P10600 412 aa20.1■□□□□ 0.81
SEC13-218ENST00000490283 PTPN11Q06124 597 aaPredicted RBP20.1■□□□□ 0.81
SEC13-218ENST00000490283 NBPF20Q3BBV1 942 aa20.1■□□□□ 0.81
SEC13-218ENST00000490283 NFRKBQ6P4R8 1299 aa20.1■□□□□ 0.81
SEC13-218ENST00000490283 DEFB123Q8N688 67 aa20.1■□□□□ 0.81
SEC13-218ENST00000490283 EMID1Q96A84 441 aaPredicted RBP20.1■□□□□ 0.81
SEC13-218ENST00000490283 JAKMIP1Q96N16 626 aaKnown RBP20.1■□□□□ 0.81
SEC13-218ENST00000490283 NOD1Q9Y239 953 aa20.1■□□□□ 0.81
SEC13-218ENST00000490283 KLF18A0A0U1RQI7 1052 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 GOLGA8AA7E2F4 631 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 GOLGA8BA8MQT2 603 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 PIK3CDO00329 1044 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 PSMA5P28066 241 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 CYP2C18P33260 490 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 HSPA4P34932 840 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 PSRC1Q6PGN9 363 aaPredicted RBP20.09■□□□□ 0.81
SEC13-218ENST00000490283 BLOC1S2Q6QNY1 142 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 HEATR3Q7Z4Q2 680 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 IL31RAQ8NI17 732 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 PPTC7Q8NI37 304 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 KATNAL1Q9BW62 490 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 PSTPIP2Q9H939 334 aa20.09■□□□□ 0.81
SEC13-218ENST00000490283 BAZ2BQ9UIF8 2168 aaKnown RBP20.09■□□□□ 0.81
SEC13-218ENST00000490283 CSF2RAP15509 400 aa20.08■□□□□ 0.81
SEC13-218ENST00000490283 RCAN1P53805 252 aa20.08■□□□□ 0.81
SEC13-218ENST00000490283 EPHB4P54760 987 aa20.08■□□□□ 0.81
SEC13-218ENST00000490283 XRRA1Q6P2D8 792 aa20.08■□□□□ 0.81
SEC13-218ENST00000490283 USP17L6PQ6QN14 398 aa20.08■□□□□ 0.81
SEC13-218ENST00000490283 TRMT13Q9NUP7 481 aaKnown RBP20.08■□□□□ 0.81
SEC13-218ENST00000490283 FRMPD4Q14CM0 1322 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 CCDC196A0A1B0GTZ2 297 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 hCG_1642624A0A1W2PR95 340 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 SPDYE3A6NKU9 549 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 EPB41L2O43491 1005 aaKnown RBP20.07■□□□□ 0.8
SEC13-218ENST00000490283 RGS20O76081 388 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 GGPS1O95749 300 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 KCNB2Q92953 911 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 SPATA33Q96N06 139 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 NOC4LQ9BVI4 516 aaKnown RBP20.07■□□□□ 0.8
SEC13-218ENST00000490283 MTIF3Q9H2K0 278 aaKnown RBP20.07■□□□□ 0.8
SEC13-218ENST00000490283 EHMT1Q9H9B1 1298 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 SNX14Q9Y5W7 946 aa20.07■□□□□ 0.8
SEC13-218ENST00000490283 MEIS2O14770 477 aa20.06■□□□□ 0.8
SEC13-218ENST00000490283 UBA1P22314 1058 aaKnown RBP20.06■□□□□ 0.8
SEC13-218ENST00000490283 CCL23P55773 120 aa20.06■□□□□ 0.8
SEC13-218ENST00000490283 SMAD3P84022 425 aaKnown RBP20.06■□□□□ 0.8
SEC13-218ENST00000490283 CELF3Q5SZQ8 465 aaKnown RBP20.06■□□□□ 0.8
SEC13-218ENST00000490283 ZNF697Q5TEC3 545 aa20.06■□□□□ 0.8
SEC13-218ENST00000490283 NLRX1Q86UT6 975 aa20.06■□□□□ 0.8
SEC13-218ENST00000490283 ZFP91Q96JP5 570 aaPredicted RBP20.06■□□□□ 0.8
SEC13-218ENST00000490283 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.06■□□□□ 0.89e-10■□□□□ 8.2
SEC13-218ENST00000490283 IL23AQ9NPF7 189 aa20.06■□□□□ 0.8
SEC13-218ENST00000490283 CNTNAP5Q8WYK1 1306 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 hCG_1984214I3L0E3 225 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 NOP56O00567 594 aaKnown RBP20.05■□□□□ 0.8
SEC13-218ENST00000490283 FIBPO43427 364 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 CYP2C9P11712 490 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 METAP2P50579 478 aaKnown RBP eCLIP20.05■□□□□ 0.85e-9■■■□□ 14.6
SEC13-218ENST00000490283 NAPAP54920 295 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 NEDD9Q14511 834 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 MYSM1Q5VVJ2 828 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 PCNX4Q63HM2 1172 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 Q6ZUG5 572 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 Q7L0L9 218 aa20.05■□□□□ 0.8
SEC13-218ENST00000490283 RPUSD2Q8IZ73 545 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1236.8 ms