RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PDLIM7Q9NR12 457 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 DLL4Q9NR61 685 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 SLC52A1Q9NWF4 448 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 PLA2G2DQ9UNK4 145 aa4.54□□□□□ -1.68
DEPDC1-204ENST00000489862 IRS2Q9Y4H2 1338 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 STXBP3O00186 592 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 AURKAO14965 403 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 PPM1BO75688 479 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 L1CAMP32004 1257 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 MAPKAPK2P49137 400 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 ZNF200P98182 395 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 NR1I3Q14994 352 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 CCDC144BQ3MJ40 725 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 KIAA1211LQ6NV74 962 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 ZC3H14Q6PJT7 736 aaKnown RBP4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 SCUBE1Q8IWY4 988 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 MICAL1Q8TDZ2 1067 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 TANGO6Q9C0B7 1094 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 TGIF2Q9GZN2 237 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 CGGBP1Q9UFW8 167 aaPredicted RBP4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 INPP5FQ9Y2H2 1132 aa4.53□□□□□ -1.68
DEPDC1-204ENST00000489862 CYBBP04839 570 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 RCSD1Q6JBY9 416 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 VHLLQ6RSH7 139 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 PAQR3Q6TCH7 311 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 NOL8Q76FK4 1167 aaKnown RBP4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 ARHGEF39Q8N4T4 335 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 NLGN2Q8NFZ4 835 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 VOPP1Q96AW1 172 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 SEC16BQ96JE7 1060 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 ZNF341Q9BYN7 854 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 KLC2Q9H0B6 622 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 RXFP1Q9HBX9 757 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 APEX2Q9UBZ4 518 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 SUGT1Q9Y2Z0 365 aa4.52□□□□□ -1.69
DEPDC1-204ENST00000489862 ZNF536O15090 1300 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 C2orf71A6NGG8 1288 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 F8W031 263 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 SRGAP3O43295 1099 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 PPP1R11O60927 126 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 NCLP19338 710 aaKnown RBP4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 CASP7P55210 303 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 AMPD2Q01433 879 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 EGFLAMQ63HQ2 1017 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 EEF1DP3Q658K8 133 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 CPNE8Q86YQ8 564 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 ZNF513Q8N8E2 541 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 ZNF526Q8TF50 670 aaPredicted RBP4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 ANAPC16Q96DE5 110 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 KLHL42Q9P2K6 505 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 FBLN5Q9UBX5 448 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 RWDD3Q9Y3V2 267 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 TBX22Q9Y458 520 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 BACE2Q9Y5Z0 518 aa4.51□□□□□ -1.69
DEPDC1-204ENST00000489862 SEPHS1P49903 392 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 CORO7P57737 925 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 PRR5P85299 388 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 FOXO4P98177 505 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 DPY19L2P1Q6NXN4 242 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 RCC1LQ96I51 464 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 CRAMP1Q96RY5 1269 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 CCSER2Q9H7U1 834 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 AKT3Q9Y243 479 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 TLDC2A0PJX2 215 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 ANKRD34BA5PLL1 514 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 GTF2F1P35269 517 aaKnown RBP eCLIP4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 BHLHA9Q7RTU4 235 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 LGR4Q9BXB1 951 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 BCAS3Q9H6U6 928 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 GULP1Q9UBP9 304 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 DBR1Q9UK59 544 aaKnown RBP4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 FAN1Q9Y2M0 1017 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 MRVI1Q9Y6F6 885 aa4.5□□□□□ -1.69
DEPDC1-204ENST00000489862 KCNH1O95259 989 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 PLA2G1BP04054 148 aaKnown RBP4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 GLI4P10075 376 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 ATF2P15336 505 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 ATF4P18848 351 aaPredicted RBP4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 GRB10Q13322 594 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 JAZF1Q86VZ6 243 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 LGI4Q8N135 537 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 UBE2Q2Q8WVN8 375 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 GPRC5CQ9NQ84 441 aa4.49□□□□□ -1.69
DEPDC1-204ENST00000489862 CCDC180Q9P1Z9 1646 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 NPHP3-ACAD11A0A0J9YXS1 232 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 PAMP19021 973 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 MC3RP41968 323 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 IRX6P78412 446 aaPredicted RBP4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 HTRA3P83110 453 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 DPTQ07507 201 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 KIAA2012Q0VF49 1180 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 SDE2Q6IQ49 451 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 NOP9Q86U38 636 aaKnown RBP4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 LZTR1Q8N653 840 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 BVESQ8NE79 360 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 PMFBP1Q8TBY8 1022 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 PPP1R14AQ96A00 147 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 APBA2Q99767 749 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 MTA3Q9BTC8 594 aa4.48□□□□□ -1.69
DEPDC1-204ENST00000489862 CAPN10Q9HC96 672 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms