RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 SLC17A8Q8NDX2 589 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 KLHDC9Q8NEP7 349 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 VTI1AQ96AJ9 217 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
CNOT9-207ENST00000489687 ZNF830Q96NB3 372 aaPredicted RBP6.76□□□□□ -1.33
CNOT9-207ENST00000489687 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 UPF3AQ9H1J1 476 aaKnown RBP6.76□□□□□ -1.33
CNOT9-207ENST00000489687 RANBP17Q9H2T7 1088 aaKnown RBP6.76□□□□□ -1.33
CNOT9-207ENST00000489687 ABHD16BQ9H3Z7 469 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 TMEM39AQ9NV64 488 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 GEMIN8Q9NWZ8 242 aaKnown RBP6.76□□□□□ -1.33
CNOT9-207ENST00000489687 MTMR10Q9NXD2 777 aa6.76□□□□□ -1.33
CNOT9-207ENST00000489687 BDP1A6H8Y1 2624 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 BRWD1Q9NSI6 2320 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 DLL1O00548 723 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 DHX16O60231 1041 aaKnown RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 ACRP10323 421 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 HOXB3P14651 431 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 CYP2C18P33260 490 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 NOVP48745 357 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 ALDH5A1P51649 535 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 CHMP4BP1P59074 171 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 FPGSQ05932 587 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 GABPB1Q06547 395 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 CDC37Q16543 378 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 FSCN1Q16658 493 aaKnown RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 MSL3Q8N5Y2 521 aaKnown RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 ENAHQ8N8S7 591 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 PNMA1Q8ND90 353 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 CLEC4DQ8WXI8 215 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 COPS5Q92905 334 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 GLT1D1Q96MS3 346 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 TRPV6Q9H1D0 765 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 NPDC1Q9NQX5 325 aaPredicted RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 TBX21Q9UL17 535 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 NOL7Q9UMY1 257 aaKnown RBP6.75□□□□□ -1.33
CNOT9-207ENST00000489687 SCN10AQ9Y5Y9 1956 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 TANC1Q9C0D5 1861 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 TNKSO95271 1327 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 RAD50Q92878 1312 aa6.75□□□□□ -1.33
CNOT9-207ENST00000489687 MOXD2PA6NHM9 499 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 GRXCR1A8MXD5 290 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 DCDC2CA8MYV0 355 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 ZNF213O14771 459 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 KIAA0355O15063 1070 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 DYNC1LI2O43237 492 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 SORBS3O60504 671 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 PLA2G6O60733 806 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 SNHG28P0DPA3 235 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 CSF2RAP15509 400 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 CST5P28325 142 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 GJA9P57773 515 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 RPS6P62753 249 aaKnown RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 PTH1RQ03431 593 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 COL9A3Q14050 684 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TKFCQ3LXA3 575 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TTC22Q5TAA0 569 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 C1orf53Q5VUE5 145 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TAPT1Q6NXT6 567 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 SASS6Q6UVJ0 657 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 BTNL9Q6UXG8 535 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 CLEC17AQ6ZS10 378 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 CYB5R4Q7L1T6 521 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 ANKRD33Q7Z3H0 272 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 METTL3Q86U44 580 aaKnown RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 FAM126BQ8IXS8 530 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TTC13Q8NBP0 860 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 NUP133Q8WUM0 1156 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 MYLIPQ8WY64 445 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TBC1D5Q92609 795 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 ESR2Q92731 530 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 PDLIM2Q96JY6 352 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 PRIMPOLQ96LW4 560 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.332e-7■■■■□ 26.5
CNOT9-207ENST00000489687 TTYH1Q9H313 450 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 RNF41Q9H4P4 317 aaPredicted RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 SENP2Q9HC62 589 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 COL20A1Q9P218 1284 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 GNEQ9Y223 722 aaKnown RBP6.74□□□□□ -1.33
CNOT9-207ENST00000489687 TET1Q8NFU7 2136 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 KIAA1217Q5T5P2 1943 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 GRIN2DO15399 1336 aa6.74□□□□□ -1.33
CNOT9-207ENST00000489687 DOCK5Q9H7D0 1870 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 ASB14A6NK59 587 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 TULP2O00295 520 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 B4GALT4O60513 344 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 ARIH2O95376 493 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 MYL3P08590 195 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 FDX1P10109 184 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 MFAP1P55081 439 aaKnown RBP6.73□□□□□ -1.33
CNOT9-207ENST00000489687 CCL23P55773 120 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 HMGN5P82970 282 aaKnown RBP6.73□□□□□ -1.33
CNOT9-207ENST00000489687 IMMTQ16891 758 aaKnown RBP6.73□□□□□ -1.33
CNOT9-207ENST00000489687 SLC35G1Q2M3R5 365 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 QRICH1Q2TAL8 776 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 ZNF697Q5TEC3 545 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
CNOT9-207ENST00000489687 CHST3Q7LGC8 479 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms